Arabidopsis thaliana (thale cress): AT4G35740
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Entry
AT4G35740 CDS
T00041
Symbol
RecQl3
Name
(RefSeq) DEAD/DEAH box RNA helicase family protein
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03440
Homologous recombination
ath03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AT4G35740 (RecQl3)
03460 Fanconi anemia pathway
AT4G35740 (RecQl3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ath03032
]
AT4G35740 (RecQl3)
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT4G35740 (RecQl3)
Enzymes [BR:
ath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AT4G35740 (RecQl3)
DNA replication proteins [BR:
ath03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
AT4G35740 (RecQl3)
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
AT4G35740 (RecQl3)
Bloom's syndrome complex (BTR)
AT4G35740 (RecQl3)
FA (Fanconi anemia) pathway
AT4G35740 (RecQl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
829727
NCBI-ProteinID:
NP_195299
TAIR:
AT4G35740
UniProt:
Q9FT72
LinkDB
All DBs
Position
4:16935988..16940372
Genome browser
AA seq
713 aa
AA seq
DB search
MKKSPLPVQNVQSSDKNVAGKEALVKLLRWHFGHADFRGKQLEAIQAVVSGRDCFCLMPT
GGGKSICYQIPALAKPGIVLVVSPLIALMENQVMALKEKGIAAEYLSSTQATHVKNKIHE
DLDSGKPSVRLLYVTPELIATKGFMLKLRKLHSRGLLNLIAIDEAHCISSWGHDFRPSYR
QLSTLRDSLADVPVLALTATAAPKVQKDVIDSLNLRNPLVLKSSFNRPNIFYEVRYKDLL
DNAYTDLGNLLKSCGNICAIIYCLERTTCDDLSVHLSSIGISSAAYHAGLNSKMRSTVLD
DWLSSKKQIIVATVAFGMGIDKKDVRMVCHFNIPKSMESFYQESGRAGRDQLPSRSVLYY
GVDDRKKMEYLLRNSENKKSSSSKKPTSDFEQIVTYCEGSGCRRKKILESFGEEFPVQQC
KKTCDACKHPNQVAHCLEELMTTASRRHNSSRIFITSSNNKTNEGQYSEFWNRNEDGSNS
NEEISDSDDATEAANSVTGPKLSKKLGLDEKLVLLEQAEEKYYERNKQVKKSEKNAISEA
LRDSSKQRLLDALTRVLQLLACVEEIDSQKGSEFLENECYRKYSKAGKSFYYSQIASTVR
WLGTASRDELMTRLSSVVSLAREQEPLEEPLLATEPVENIEEEDDGKTNTVESRVDEPTQ
ELVVSPILSPIRLPQVPSFSEFVNRRKIKQNTLIDKSSEGFDDKKPAKIMKLQ
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatcgccgttgccggtgcagaatgtgcagagctccgataagaacgttgccgga
aaagaagcattggtgaagcttttgagatggcatttcggtcatgcagatttcagagggaag
caattggaggctattcaagctgttgtatctggaagggattgcttttgcttgatgccaacg
ggaggaggaaaatcgatttgttatcagatacctgcattagctaaacctggaatcgtcctt
gttgtgtctcctttgattgctttgatggaaaatcaagtaatggcgctgaaggagaaaggt
attgctgctgagtatctctcatctacccaagctacacatgttaagaacaagatccatgaa
gaccttgattctggaaaaccctcagtaagattgctgtatgttactccagaattgattgcg
acgaaagggtttatgttgaagctgagaaaactccattccaggggtttgctaaatcttata
gctatagacgaggcgcattgcatctcatcatggggccacgacttcagacctagttatcgt
caactttcaaccttgagagattctttggcagatgttccggtgttggctctaactgctact
gctgctcccaaagtacaaaaggatgttatcgactccttgaatttgcggaatcctttggtc
ctcaagtcttctttcaatcgcccaaatatcttctatgaagttcgttacaaagatcttttg
gataatgcttatactgatttgggcaacttgctcaagtcatgtggaaatatttgtgcaatt
atctattgccttgagcgtacaacctgtgatgacttgtctgttcatctttccagtattggg
atttcttctgcggcctatcatgcaggactcaatagtaaaatgaggagtactgttttagat
gattggctgtcctccaagaagcaaattattgttgccacagtggctttcggaatgggcata
gataagaaggatgtcagaatggtttgccattttaacattccaaaatcaatggaatctttc
tatcaagagtctggtagagcaggtcgggatcaattaccttcaagaagtgtattatactat
ggtgtagatgacagaaagaaaatggaatatcttctgcggaattcggagaataagaaatcc
tcatcctctaagaagcctacatctgactttgaacagattgtgacgtactgcgaaggttct
ggatgccgaagaaaaaagattcttgagagctttggtgaagagtttcctgtgcagcaatgc
aaaaaaacgtgtgatgcatgtaagcatcctaatcaagttgctcattgcttggaggagctt
atgaccactgcctcccgaagacacaattcttctcgaattttcatcaccagctcgaacaat
aagaccaatgagggacagtactctgagttctggaatcgtaatgaagatggaagcaattcc
aatgaggaaatatcagattcagatgatgccactgaggctgccaatagcgtaacaggacct
aaactatcgaaaaagttgggactagacgagaaattggttttactggagcaagctgaggaa
aagtactacgaaaggaataaacaggtcaaaaagtcagagaagaatgcaatatctgaagcc
ctaagggattcgagcaagcagagactcttggatgcgttgacacgagtacttcagctgctt
gcctgtgtggaggagattgattcccagaaaggatccgagtttcttgaaaatgagtgctat
cgaaaatatagcaaagcagggaaatcgttttactactcgcagatagcgagtactgtgaga
tggctaggaaccgcaagcagagatgagctaatgacccgacttagctcagtggtcagtttg
gctagagagcaagagccattagaagagccgttgctggctactgaaccggtggagaacata
gaggaagaagatgatggtaagactaacacggtcgagtcaagggttgatgaaccgacacaa
gagctagtggtgagtccgatcctttcgcctataaggcttccacaagttccatcattctca
gagtttgttaaccggagaaaaataaaacaaaacacattgatagataaatcttctgaaggt
tttgatgacaagaaaccggcaaagataatgaagcttcaataa
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