Arabidopsis thaliana (thale cress): AT4G35785
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Entry
AT4G35785 CDS
T00041
Name
(RefSeq) RNA-binding (RRM/RBD/RNP motifs) family protein
KO
K12897
transformer-2 protein
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT4G35785
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ath01009
]
AT4G35785
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT4G35785
Protein phosphatases and associated proteins [BR:
ath01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
AT4G35785
Spliceosome [BR:
ath03041
]
Common components
Common spliceosomal components
SR proteins
AT4G35785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
829732
NCBI-ProteinID:
NP_001190929
TAIR:
AT4G35785
UniProt:
F4JNU1
LinkDB
All DBs
Position
4:complement(16952963..16955342)
Genome browser
AA seq
201 aa
AA seq
DB search
MADSPQRRRDSRSPSPRKERARSRSRSRSRSRSRPRLRSRSRSLPRPVSPSRSRGRILRG
NLFFITCTLCRSRSRSRGSEVENPGTTLYVTGLSTRVTDKDLEAHFAKEGKVASCFLVME
PRTRVSRGFAFVTMSSLKDAERCIKYLNQSVLEGRYITVERKILHQATIRDDKIQEKAPE
NSHPRPLSWLEKLQRQRSRRP
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctcctcaaagaagaagggattcacgatctccttcaccccgaaaagaacga
gctagatccagatccaggtctaggtccaggtctagatccaggcccaggcttaggtccagg
tcaagatctttgccaaggcctgtttctccatcacgaagccgtggaagaatattgcgtggt
aatctttttttcattacctgtacactttgtaggtcaaggtcaagaagccgtggaagtgaa
gttgaaaaccctggtaccactctctatgtgactggcctatctacaagagtcactgacaag
gatcttgaagcacatttcgccaaggaaggaaaggttgcgtcttgttttcttgtgatggag
ccgcgcacccgtgtgtctcgtggttttgcctttgttacaatgagcagccttaaagatgct
gagcggtgcattaaatatctcaaccagtctgtactagaaggccgatacataactgtggaa
aggaaaatattgcatcaagcaacaatcagagatgataagatccaggagaaagcgcccgag
aactcccaccccaggccactatcttggcttgaaaagctccagagacagcgatcgagaagg
ccgtag
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