Arabidopsis thaliana (thale cress): AT4G36960
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Entry
AT4G36960 CDS
T00041
Name
(RefSeq) RNA-binding (RRM/RBD/RNP motifs) family protein
KO
K14411
RNA-binding protein Musashi
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AT4G36960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT4G36960
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
AT4G36960
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_11
PROCT
Motif
Other DBs
NCBI-GeneID:
829850
NCBI-ProteinID:
NP_568011
TAIR:
AT4G36960
UniProt:
Q94AC3
A0A5S9XZA7
LinkDB
All DBs
Position
4:17426918..17429765
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AA seq
379 aa
AA seq
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MERKLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNA
LKGEHFLGNRILEVKVATPKEEMRQPAKKVTRIFVARIPSSVSESDFRSHFERYGEITDL
YMPKDYNSKQHRGIGFITFSSADSVEDLMEDTHDLGGTTVAVDRATPKEDDHPPRPPPVA
RMSRPPVAIAGGFGAPGGYGAYDAYISAATRYAALGAPTLYDNPATFYGRGEPTTRGIGN
KIFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARR
SHEICGQEVAIDSATPLDEAGPSAGASSMLSSSRPEYFGGYGGPMRAFGRMYGGMSLDDW
GYGMPNARPSRPDRRYRPY
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggaacggaagcttgtggttttgggaatcccgtgggatattgattccgatgggcttaag
gattacatgtcaaaatttggagacttggaggattgtattgtcatgaaggatcgatcaact
ggaagatctcgtggatttggatatgtcacttttgcttcagctgaagatgcaaagaatgct
ttgaaaggtgaacactttttagggaacaggatcttggaagttaaagtggctacaccaaag
gaagagatgagacagcctgcaaaaaaagtgacgaggatcttcgttgctcgaatcccttca
tcagtctctgaatcagatttccgaagccattttgagaggtatggggaaataacagactta
tacatgcctaaggactacaactcgaagcagcaccgaggaatagggtttatcacattctct
agtgctgattcagtggaggatctgatggaggacactcatgatctgggaggtacaacagtt
gctgttgatcgggcaacaccaaaagaggatgatcatccgcctaggccaccgccagtggct
agaatgtcgcgcccacccgtggctattgcaggtggatttggagctccaggtggttatgga
gcttatgatgcttacatttctgcagctacaagatacgcagcgcttggtgcccctactttg
tatgataatcccgccacgttttatggaagaggggaaccaaccacaaggggaataggaaac
aagatctttgttggacggcttcctcaagaagcatccgttgatgatcttcgcgattatttt
gggagatttggccatattcaagatgcttatattccaaaggacccaaagagaagtggacat
agaggttttggatttgttacctttgctgaaaatggtgttgcagatcgtgtagcccgaaga
tctcatgaaatctgtggacaagaggtagcaatagattcagcaacgcctcttgatgaagct
ggacctagcgctggcgcaagttccatgttaagttcttctcgtcctgaatattttggtggc
tatggaggtcctatgcgcgcatttggtcgaatgtatggaggcatgagcttggacgattgg
ggatatggaatgccaaacgcaagaccatcaagaccagaccggaggtaccggccatactaa
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