Arabidopsis thaliana (thale cress): AT4G37930
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Entry
AT4G37930 CDS
T00041
Symbol
SHM1
Name
(RefSeq) serine transhydroxymethyltransferase 1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00260
Glycine, serine and threonine metabolism
ath00460
Cyanoamino acid metabolism
ath00630
Glyoxylate and dicarboxylate metabolism
ath00670
One carbon pool by folate
ath01100
Metabolic pathways
ath01110
Biosynthesis of secondary metabolites
ath01200
Carbon metabolism
ath01230
Biosynthesis of amino acids
ath01240
Biosynthesis of cofactors
ath04981
Folate transport and metabolism
Module
ath_M00532
Photorespiration
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AT4G37930 (SHM1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AT4G37930 (SHM1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AT4G37930 (SHM1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AT4G37930 (SHM1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AT4G37930 (SHM1)
Enzymes [BR:
ath01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AT4G37930 (SHM1)
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Motif
Pfam:
SHMT
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
829949
NCBI-ProteinID:
NP_195506
TAIR:
AT4G37930
UniProt:
Q9SZJ5
A0A178UYX1
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Position
4:complement(17831731..17835017)
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AA seq
517 aa
AA seq
DB search
MAMAMALRRLSSSIDKPIRPLIRSTSCYMSSLPSEAVDEKERSRVTWPKQLNAPLEEVDP
EIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM
AETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHERIMALDLPHGGHLSH
GYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQMEKSATLFRPKLIVAGASAYARLYDY
ARIRKVCNKQKAVMLADMAHISGLVAANVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRK
GVKEINKQGKEVLYDFEDKINQAVFPGLQGGPHNHTITGLAVALKQATTSEYKAYQEQVL
SNSAKFAQTLMERGYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVHIASNKNTVPGD
VSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTIALKVKSEAQGTKLKDFVSAME
SSSTIQSEIAKLRHEVEEFAKQFPTIGFEKETMKYKN
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggccatggctcttcgaaggctttcttcttcaattgacaaacccattcgtcct
cttattcgatccacttcatgttacatgtcttctttgcccagtgaagctgttgatgagaag
gaaagatctcgtgtcacttggccaaaacagcttaacgcacctttagaggaggttgatcct
gagattgctgacattattgagcatgagaaagctagacaatggaagggacttgaacttatt
ccatctgagaacttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaac
aaatacagtgaaggctatcctggtgccagatactatggaggaaatgagtatatagacatg
gcagaaaccttatgccagaagcgcgctcttgaagctttccggttagatcctgaaaagtgg
ggagtgaatgttcaacctttgtctggatctcctgccaacttccatgtgtacactgcattg
ttaaagcctcatgaaagaatcatggcacttgatcttcctcatggtggtcatctttctcat
ggttatcagactgacaccaagaagatatcagctgtgtctatcttctttgaaacaatgccc
tatagattggacgagagcactggctacatcgactacgatcagatggagaaaagtgctact
cttttcaggccaaaattgattgttgctggtgcaagtgcttatgctagattgtatgactat
gcccgcatcagaaaggtctgtaacaagcaaaaagctgtaatgctagcagatatggcacac
atcagtggtttggttgctgctaatgtaatcccttcaccgttcgactatgctgatgttgta
accaccacaactcacaagtcacttcgtggaccccgtggagccatgattttcttcagaaag
ggtgttaaggaaattaacaagcaagggaaagaggttttgtatgattttgaagacaagatc
aaccaagctgtcttccctggtcttcaaggtggtccacacaaccacactatcacaggacta
gctgttgctttgaaacaggcaactacttcagagtacaaagcataccaagaacaagtcctg
agtaacagtgcaaagtttgctcagactctaatggagagaggatatgaacttgtttctggt
ggaactgacaaccatctggttctagtgaatctaaagcccaagggaattgatggatctaga
gttgagaaagtgttggaagctgttcacattgcatccaacaaaaacactgttcctggagat
gtttctgccatggttcctggtggaatcagaatgggtactcctgctctcacttccagaggc
tttgttgaggaagactttgccaaagtagctgaatacttcgacaaagctgtgacaatagct
ctcaaagtcaaatctgaagctcaaggaaccaagttgaaggatttcgtgtcagcaatggaa
tcctcttcaaccatccaatccgagattgcgaaactgcgccatgaagtcgaggaattcgct
aagcagttcccaacaattgggtttgagaaagaaaccatgaagtacaagaactaa
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