Arabidopsis thaliana (thale cress): AT4G38200
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Entry
AT4G38200 CDS
T00041
Name
(RefSeq) SEC7-like guanine nucleotide exchange family protein
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
AT4G38200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT4G38200
Membrane trafficking [BR:
ath04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
AT4G38200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
Sec7-like_HDS
BIG2_C
DCB
Mon2_C
Motif
Other DBs
NCBI-GeneID:
829976
NCBI-ProteinID:
NP_195533
TAIR:
AT4G38200
UniProt:
F4JSZ5
A0A178UXZ2
LinkDB
All DBs
Position
4:17915206..17922732
Genome browser
AA seq
1687 aa
AA seq
DB search
MSSSQNLGGATRCGRVIGPSLDKIIKNAAWRKHTFLVSACKSVLDKLEALSDSPDPSSPL
FGLTTSDADAVLQPLLLSLDTGYAKVIEPALDCSFKLFSLSLLRGEVCSSSPDSLLYKLI
HAICKVCGIGEESIELAVLRVLLAAVRSPRILIRGDCLLHLVRTCYNVYLGGFNGTNQIC
AKSVLAQIMLIVFTRSEANSMDASLKTVNVNDLLAITDKNVNEGNSVHICQGFINDVITA
GEAAPPPDFALVQPPEEGASSTEDEGTGSKIREDGFLLFKNLCKLSMKFSSQENTDDQIL
VRGKTLSLELLKVIIDNGGPIWLSDERFLNAIKQLLCLSLLKNSALSVMSIFQLQCAIFT
TLLRKYRSGMKSEVGIFFPMLVLRVLENVLQPSFVQKMTVLSLLENICHDPNLIIDIFVN
FDCDVESPNIFERIVNGLLKTALGPPPGSSTILSPVQDITFRHESVKCLVSIIKAMGTWM
DQQLSVGDSLLPKSLENEAPANNHSNSNEEDGTTIDHDFHPDLNPESSDAATLEQRRAYK
IERQKGVTLFNRKPSKGIEFLISSKKVGNSPDEVVSFLRNTTGLNATMIGDYLGEREDFP
MKVMHAYVDSFDFKEMNFGEAIRFFLRGFRLPGEAQKIDRIMEKFAERFCKCNPNSFSSA
DTAYVLAYSVIMLNTDAHNIMVKEKMTKADFIRNNRGIDDGKDLPEEYLGALYDQVVINE
IKMSSDSSAPESRQSNGLNKLLGLDGILNLVYWTQTEEKAVGANGLLIKDIQEKFRSKSG
KSESAYHVVTDVAILRFMVEVSWGPMLAAFSVTLDQSDDRLAAVECLRGFRYAVHVTAVM
GMQTQRDAFVTSMAKFTNLHCAGDMKQKNVDAVKAIISIAIEDGNHLQDAWEHILTCLSR
IEHLQLLGEGAPSDASYFASTETEEKKALGFPNLKKKGALQNPVMMAVVRGGSYDSSTIG
PNMPGLVKQDQINNFIANLNLLDQIGSFQLNNVYAHSQRLKTEAIVAFVKALCKVSMSEL
QSPTDPRVFSLTKLVEIAHYNMNRIRLVWSRIWSILSDFFVSVGLSENLSVAIFVMDSLR
QLSMKFLEREELANYNFQNEFLRPFVIVMQKSSSAEIRELIVRCISQMVLSRVSNVKSGW
KSVFKVFTTAAADERKNIVLLAFETMEKIVREYFSYITETEATTFTDCVRCLITFTNSTF
TSDVSLNAIAFLRFCALKLADGGLVWNEKGRSSSPSTPVTDDHSPSTQNFMDADENISYW
VPLLTGLSKLTSDSRSAIRKSSLEVLFNILKDHGHIFSRTFWIGVFSSVIYPIFNSVWGE
NDLLSKDEHSSFPSTFSSHPSEVSWDAETSAMAAQYLVDLFVSFFTVIRSQLSSVVSLLA
GLIRSPAQGPTVAGVGALLRLADELGDRFSENEWKEIFLAVNEAASLTLSSFMKTLRTMD
DIPDEDTLSDQDFSNEDDIDEDSLQTMSYVVARTKSHITVQLQVVQVVTDLYRIHQQSLL
ASHVTVILEILSSISSHAHQLNSDLILQKKVRRACSILELSEPPMLHFENDTFQNYLDIL
QAIVTNNPGVSLELNVESQLMTVCMQILKMYLKCTLFQGDELEETRQPKNWILPMGAASK
EEAAARSPLVVAVLKALRELKRDSFKRYAPNFFPLLVELVRSEHSSSQVPQVLSTVFHTC
MGAMMDE
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcgcagaaccttggtggcgccaccagatgcggccgggtgattgggccatct
ttggacaagatcataaaaaatgccgcctggcgcaagcacaccttccttgtttccgcctgt
aagtctgtactcgacaagctcgaagctctctccgattctcccgatccttcgtcgcctctc
ttcggtctcactacctccgatgcagatgccgttcttcagccactccttctctctcttgat
accggctatgctaaggttattgagcctgctctcgattgctctttcaagctcttctctctc
tccctcctccggggcgaggtctgctcctcgtcccctgattctcttctctacaagctcatc
catgcgatctgcaaggtttgcggcatcggcgaggagtcaattgagctggcggtccttcgt
gtcctcctcgccgccgtcagatctcctcgcatcctaatccgtggcgattgtttgctccat
ctagtcaggacctgctacaatgtgtatctcggcggattcaacgggaccaaccagatctgc
gctaaatctgtgctggctcagatcatgctcatcgtcttcaccagatccgaggcgaattcc
atggatgcatcactcaaaacggttaatgtcaacgacttgcttgccatcacggataagaat
gtcaacgaagggaactctgttcatatttgtcagggattcattaacgacgtcattacggcc
ggggaagcagctcctcctccggatttcgcgctagtccaaccaccagaggaaggtgcttct
tcaactgaggatgaaggcacaggcagcaagatcagggaagacggtttccttctcttcaaa
aatctctgtaagttgtctatgaagttctcgtcacaagagaacaccgacgatcagattctt
gtgagaggcaagactttgtctctcgagttgctcaaagtcatcattgataacggcggccca
atttggctctctgacgaaaggtttctaaatgccatcaagcagttgctctgcttgtcgctg
ttaaagaatagcgcactttcggttatgtctatttttcaacttcagtgtgctatcttcaca
accttactacggaaatatagatcgggtatgaaatcagaagtaggtatattctttccgatg
cttgtcctccgggtccttgaaaatgttctccagccaagtttcgtgcagaaaatgaccgtg
ctcagcttactcgagaacatttgccacgacccaaacctaatcattgacatatttgtgaac
tttgactgcgatgtggagtctcccaacatcttcgaaaggattgtcaacggtcttctgaaa
actgctctagggcctcctcctggttcatcgacaatattgtccccagtccaggatattact
tttcggcacgaatctgtgaagtgcttggttagcattattaaggcaatgggaacatggatg
gaccaacaattgagcgtgggagattcacttctgcctaagagcttagaaaatgaggcacct
gcaaacaatcattcaaactcaaatgaagaagatgggacgactatagatcatgactttcac
ccagatttgaatccagagtcatcagacgctgcaactcttgaacagaggagggcatacaaa
attgaacgccagaaaggcgtcactctattcaatagaaagccgtcaaagggtattgagttt
cttatcagctctaaaaaggttggcaactccccggatgaggtggtgtcgttcctgaggaat
accacaggcttgaatgcaaccatgattggtgattatttgggtgaaagagaggattttcca
atgaaagttatgcatgcctatgtggactcgtttgatttcaaggagatgaattttggtgag
gcaattaggtttttcttaaggggcttcaggcttcctggggaagcacagaaaattgaccgc
ataatggaaaagtttgctgaacgcttttgcaaatgcaatccaaattcattcagcagtgct
gacacagcatatgttcttgcatactctgtaataatgcttaacactgatgcccacaatatc
atggttaaagagaagatgaccaaggctgattttatcagaaataaccgaggcattgatgat
ggcaaagatctcccagaagagtatcttggtgcgctttatgaccaagttgtcataaatgaa
ataaagatgagttctgattcttcagccccagaaagcaggcagtccaatggcctgaataaa
ctactgggtctggacggtatactcaatctggtttattggacacagacggaagaaaaagcg
gtgggggctaatggtcttcttataaaggatattcaagaaaagttcaggtcgaagtctgga
aaatcagaatcagcttaccatgtagtcacagacgttgcaatattgcgttttatggttgaa
gtttcctggggaccaatgcttgccgcattcagcgtgacacttgatcagagtgatgacagg
cttgctgcagttgaatgcttacgaggctttcggtatgcagttcatgtgacagcagttatg
ggtatgcaaacgcaaagagatgcatttgtcacttccatggccaagttcacaaatctccat
tgcgcaggagatatgaagcaaaagaatgtcgatgctgttaaagccataatttcaattgcc
attgaagatggtaatcacttgcaagatgcttgggagcacattttgacttgtctttctaga
atagagcatttgcaattattgggcgagggtgctccaagtgatgcatcttattttgcttca
accgagaccgaagagaagaaagccttgggttttcctaacttgaagaaaaaaggagccctc
cagaatccggtgatgatggctgtggttcgagggggctcatatgatagcagtacaattgga
ccaaatatgccggggcttgtgaagcaggaccaaatcaataacttcattgcaaacttgaat
ttgcttgaccagatcgggagttttcagttgaataatgtatatgctcatagccagcggctg
aagactgaagccatagtagcatttgttaaagctctatgcaaagtctctatgtcagaactg
cagtctcctacggatcctcgagtatttagccttacaaaattagttgagatcgcccactac
aacatgaaccgcatcaggctagtctggtctcgcatatggagcatcctgtcagattttttt
gtatctgttggcttgtcagagaatctttctgttgcaatattcgttatggactcactacga
caactgtctatgaagttcttggaacgtgaggagctggctaattacaactttcagaatgaa
tttcttcgaccatttgtcattgttatgcaaaaaagcagttctgctgaaataagagaacta
atagttcggtgcatttctcaaatggtactcagccgtgtcagtaatgtgaaatcagggtgg
aaaagtgttttcaaggttttcacaactgcagcagctgatgaaaggaagaacattgtattg
ttggcctttgagacgatggaaaaaattgtccgagagtacttttcatatatcacagagacg
gaggcaacaacctttactgattgtgttcgatgcctcataacttttacaaacagcacattt
accagcgatgttagcctgaacgctatcgcgtttctacgattttgtgccctaaaacttgca
gacggaggcctcgtgtggaatgagaagggtaggtccagcagtcccagtactccagtaaca
gatgaccattcaccaagtacccaaaattttatggatgcagatgagaatatttcatattgg
gttcctttgctcacaggattgtctaagctaacttctgattccagatcagcaatccgtaaa
agctccttggaagtgctctttaatattttgaaggatcatggccatattttttcacgaaca
ttctggatcggcgtttttagttctgttatatatcctatatttaacagcgtctggggcgag
aatgatctgctttctaaagatgaacatagttcatttccatctacattttcttcacatcct
agtgaagtttcttgggatgctgagacttcagctatggcggcacagtatctggtagaccta
tttgtcagtttttttactgtgataaggtctcaactttcaagtgtagtatccttacttgct
ggtcttataagaagtccagctcagggtcctacagtagctggggttggcgcgttgctgcgg
ttggcagacgaattgggtgacaggttctcggaaaatgagtggaaggagatttttttggct
gtgaacgaagctgcttcattgacattgtctagtttcatgaaaacactgagaaccatggat
gacattccagatgaggatacattgtctgatcaggactttagtaatgaagatgacatcgac
gaggacagcctgcaaactatgtcttatgttgtggcaagaacaaaaagtcacataaccgtc
cagctgcaagttgttcaggtagtgacggatctctaccgaatccatcagcagtcattgttg
gcatcgcacgttactgttatactggagatactctcatcaatctcatcacatgcccaccag
ttaaattctgatttgatattgcagaagaaagtgaggagagcgtgctctatcctggagctc
tctgaacctcccatgcttcatttcgaaaatgacacgtttcagaactacctggacattctt
caagccatagtgacaaataatccaggagtgtcgttggagctaaacgtagagtctcagctg
atgacagtgtgtatgcaaatactgaagatgtacctgaaatgcactttgtttcagggtgat
gagttggaagaaaccaggcagcccaaaaactggattctacccatgggagcagcctcgaag
gaagaagcagcagcgagatctcccctagtggttgcagtgctgaaggctctgagggaactg
aaaagagattcattcaagaggtatgcaccgaatttcttcccattgttggtggagcttgtg
cggagcgagcacagctcttcacaagtcccacaagtcttaagcacagtgttccatacatgt
atgggtgcaatgatggatgaataa
DBGET
integrated database retrieval system
