KEGG   Arabidopsis thaliana (thale cress): AT4G38890
Entry
AT4G38890         CDS       T00041                                 
Name
(RefSeq) FMN-linked oxidoreductases superfamily protein
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ath03016]
    AT4G38890
Enzymes [BR:ath01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     AT4G38890
Transfer RNA biogenesis [BR:ath03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    AT4G38890
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4 zf-CCCH zf-CCCH_PAN3
Other DBs
NCBI-GeneID: 830044
NCBI-ProteinID: NP_195600
TAIR: AT4G38890
UniProt: Q9T0J6 A0A654FXB1
LinkDB
Position
4:complement(18135796..18139266)
AA seq 691 aa
MSDVIAEHAVDTSVEGDAKAALPVQSTKQFSVYEATSEELIERSMAPIKKEFLCPPPPSR
SVKQNDAADVRAPQSGLVQEKKSKRQLKRERREQSTINLCPQVARTEDVDSCQYKDKCRF
NHDIEAFKAQKADDIEGQCPFVASGMKCAYGLSCRFLGSHRDITGNSDDKEKSEMNFFNK
ETQRLLWKNKMTFTNADAKLKSLGLLGHAKKSNAAEEITAEKTQNGMNGTQATEVAVDSA
VSSEHTSEMIQDVDIPGPLETEEVRPMKKAKSEDQKNSKTGDVGGVYDGVKLEEETKKNG
YPTSKANVEDEDSIKIVETDSSLKLHPREKKKLIDFRDKLYLAPLTTVGNLPFRRLCKVL
GADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGSYPDTVSRVVELIDRECTV
DFIDINMGCPIDMVVNKSAGSALLNKPLRMKNIVEVSSSIVETPITIKVRTAFFEGKNRI
DSLIADIGNWGATAVTIHGRSRQQRYSKSADWDYIYQCTKNATTNLQVIGNGDVYSYLDW
NKHKSDCPELSSCMIARGALIKPWIFTEIKEQRHWDITSGERLNIMKDFVRFGLQHWGSD
TKGVETTRHFLLEWLSYTFRYIPVGLLDVIPQQINWRPPSYFGRDDLETLMMSESAGDWV
RISEMLLGKVPEGFTFAPKHKSNAYDRAENG
NT seq 2076 nt   +upstreamnt  +downstreamnt
atgtcagatgtaatagcggagcacgcggtggatactagtgttgaaggagatgcaaaggct
gcgttaccggttcaatcgacgaaacagttctctgtgtatgaagcgacttcggaagagctt
atagaacgatcaatggctcctattaagaaggagttcctttgtcctcctcctccaagccgt
tccgtgaagcaaaatgatgccgccgatgttagggcgcctcaatcgggtttggttcaggag
aagaaatctaaacgacaactgaaacgggaacgccgcgagcaatctacgatcaatctctgt
ccgcaggttgcgagaacagaagacgttgattcatgtcagtataaagacaagtgccggttt
aatcatgatattgaggctttcaaggctcagaaggcagatgatatagaggggcaatgccca
tttgtggcctctggaatgaagtgtgcatatggtttatcatgtagattcttaggcagtcac
agagatattactggtaattcagatgacaaggaaaaatcagagatgaacttttttaacaaa
gagacacagaggcttctgtggaaaaataagatgacttttacaaacgcagatgcgaaactt
aagtccctcggtctgttgggacatgccaaaaaaagcaatgctgccgaggaaattaccgca
gaaaaaactcaaaatggtatgaacggcactcaagcaactgaagtagcggttgactcagct
gtcagttctgagcatacatcagaaatgatacaagatgttgatattcctggaccattagaa
actgaggaagttcgtcccatgaaaaaggcaaaatctgaggaccaaaagaattctaaaact
ggagatgttggtggagtttatgatggcgtgaaattggaagaggaaacgaaaaagaatggg
tatcctacttcaaaagctaacgtagaagatgaggatagcatcaaaattgttgaaactgat
agtagtctaaagttgcaccctcgagaaaagaaaaagctaattgattttagggataagttg
taccttgcacccttaacaaccgtgggcaatcttcccttccgaagactttgtaaagtgttg
ggagcagatgtgacttgtggtgagatggctatgtgcacaaatcttttgcagggccaagct
tctgaatgggctctgcttagacgacattcatcggaagatctgtttggtgttcagatttgc
ggttcttatcctgacacggtgtcgcgcgtagttgaacttatagaccgagaatgcactgtt
gatttcatagatatcaacatgggttgcccgatagatatggttgtcaacaaaagtgctggt
tcagctcttctcaacaaaccattacggatgaagaacatcgtggaagtctcttcttccatt
gttgaaacacctatcactatcaaggtacgaacagcattctttgagggtaagaaccggata
gattctttaattgcagatatcggaaactggggagccactgcagtgactattcatgggcgg
tcaagacagcaacgttatagcaagtctgcagattgggactatatataccagtgtaccaaa
aacgctactactaacctacaggttataggaaatggagatgtgtactcatatttagactgg
aacaaacacaagtctgactgtcctgagttgtctagctgcatgattgctcgtggagcactg
atcaagccttggatctttactgaaattaaagagcaacggcattgggacattacctctgga
gaaagacttaacatcatgaaggacttcgtacgttttggtcttcaacattggggatccgac
acgaaaggagttgagacaactaggcatttcttgctggagtggctaagctacacatttagg
tacatacctgtcggtttgcttgatgtgatcccgcagcaaatcaactggcgtccgccttca
tactttggtcgtgatgatctcgagacactcatgatgtctgaatctgcgggtgactgggtg
cggatatcggaaatgctgcttggaaaggttccggagggcttcacatttgcccccaagcac
aaatccaacgcatatgacagagctgaaaacggctga

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