KEGG   Arabidopsis thaliana (thale cress): AT4G40070
Entry
AT4G40070         CDS       T00041                                 
Name
(RefSeq) RING/U-box superfamily protein
  KO
K10664  E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT4G40070
Enzymes [BR:ath01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     AT4G40070
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    AT4G40070
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-C3HC4_3 zf-ANAPC11 zf-RING_5 zf-RING_16 Prok-RING_4 DUF4171 RELT Tmpp129 zf-Nse zf-RING_4 Baculo_RING
Other DBs
NCBI-GeneID: 830170
NCBI-ProteinID: NP_568080
TAIR: AT4G40070
UniProt: Q8W571 A0A178UZZ5
LinkDB
Position
4:18576216..18577774
AA seq 323 aa
MMTRVECFNPHRWIILHVAIIIQSKANAQSFSPSPPDLQTGHTPSKTTVFAVLVTLFFLT
GLLSVYIRHCARSNPDSSTRYFRNRANDGSSRRGGLDNAVVESFPVFAYSSVKESKIGSK
DLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNLTAKSNKPGDED
DGVPLAAMRDHVVVDIETVEVAKSHHRRLSSEISGKFPRSNSTGHSMDRFSDGTERFTLR
LPDDVKMRLMAVKGRRLKRTRSFDVDLTAEHYCRSGEESSNTIGSGAKSGRVNWPDRWGL
TLFVSKSNSGSVRSQKSNGEPLK
NT seq 972 nt   +upstreamnt  +downstreamnt
atgatgacacgcgtcgagtgttttaatcctcaccgttggattatcttacacgtggcaatc
atcatacagagcaaagccaatgcccaatctttctcaccgagtccacccgacttgcaaacg
ggtcacactccgtcgaagaccaccgtcttcgccgttctcgtaaccctcttcttcctcacc
ggattactctccgtctatattcgccattgcgctcgctctaatcctgattcctccaccaga
tacttccgcaaccgagctaacgacggcagttcacggcgaggcggtcttgacaacgccgtc
gtcgaaagcttccctgttttcgcttactcctctgttaaagaatccaaaatcggatccaag
gatttagaatgtgcgatttgtctcaacgaattagaagatcatgaaacagtgcgattgctt
ccgatttgtaaccatttgttccatatcgattgtatcgatacttggctttactcgcacgca
acttgccctgtttgcagatctaatctcaccgcgaaatcgaataaacccggcgatgaagac
gacggtgttccgttagcagcgatgagagaccacgtcgtggttgatattgagaccgttgag
gtagcgaaaagccaccaccgacggttgagttctgaaatctccggtaagtttccgagatcg
aattcgacgggtcattcgatggatcgattcagtgacggcacagagaggtttactctgcgg
ttaccagatgatgtaaagatgcgattaatggcggtgaaaggacgtaggttgaaacgaacg
agaagctttgacgttgatttgacggcggaacactattgccggagcggtgaggaaagcagt
aacacgatcgggtctggtgcgaagtcgggtcgggtcaactggccggatcgatggggtttg
actttgttcgtttcgaagtcaaactcgggttccgttagatcacagaaatctaacggtgaa
ccgttgaaatga

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