Arabidopsis thaliana (thale cress): AT5G01160
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Entry
AT5G01160 CDS
T00041
Name
(RefSeq) RING/U-box superfamily protein
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT5G01160
04131 Membrane trafficking [BR:
ath04131
]
AT5G01160
04121 Ubiquitin system [BR:
ath04121
]
AT5G01160
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
AT5G01160
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
AT5G01160
Membrane trafficking [BR:
ath04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
AT5G01160
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
AT5G01160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
831742
NCBI-ProteinID:
NP_001331186
TAIR:
AT5G01160
UniProt:
Q9LFC0
A0A384KW62
LinkDB
All DBs
Position
5:53856..56052
Genome browser
AA seq
360 aa
AA seq
DB search
MLQIRLRRDSPTETGNGARPSPTETVTVACPDHLVLADLPVAKGIGSVTPTTVIKPVGRR
SRRQLGERVHFCVRCDFPIAIYGRLIPCDHAFCLECARSDSICYLCDERIQKIQTIKMME
GIFICAAPHCLRSFLKKLDFEAHVHDLHGSLLQADAEKEDGNQSDVQSTMQQSSASESTL
RAPLRSQLQQSRELNRSASFAKSQSGFSQVQNYPPDSDNSRPPGFETASPKPGIRFPDYP
QPMNLMQPPSLPVPMNQNPGLPQQFGFPSYPTTESGSSQQFFNGAQYEMTRTESGGSEQS
SLLGYPPPSPMTNLNFQGSYPPPSWNPGMAPPHTTQQVNRGRDGQSFGWPQENRDGFGQE
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaattcgtcttcggagggattccccgacggaaactggaaatggtgcgaggcct
tctccgacggagacggttactgtagcctgtcccgaccatctcgtcctcgccgatcttcct
gttgcgaaaggaatcggttccgtgactcccaccaccgtaatcaagcccgtcggtcgtcgt
tctcgccgtcagctaggcgagagagttcacttctgcgttcgttgcgattttccgattgca
atctatggtcgtctgattccttgtgatcatgccttttgccttgaatgtgctcgcagtgat
tccatctgctatctatgtgatgagcggattcagaagattcaaacaatcaagatgatggaa
gggatcttcatctgtgcagctcctcattgtcttaggtctttcctgaagaaacttgacttt
gaagcccatgtccatgacctccatggaagcctattacaagccgatgcagagaaagaagat
ggtaaccagtcagatgttcagagcacaatgcagcagtcttcagcttcagaatccaccttg
cgagctcctttaagatcccagctgcaacaatcccgtgaactaaacaggtcggcgtcattt
gcaaagtcacagtctggatttagtcaagtccagaattaccctccagatagcgataactct
cgccctcctggattcgaaaccgctagtcctaaaccaggaatccggttcccagactacccc
cagcctatgaatcttatgcaaccgcccagcttgcccgttccaatgaatcaaaacccgggt
ttaccacagcagtttggttttccttcgtatccaacaacagagagtggatcatctcaacaa
ttctttaacggtgctcagtacgagatgacaagaacagagagcggcggatcagaacaaagt
tcattgctcgggtatcccccgccttcaccaatgacgaatctgaatttccaaggatcgtat
cctcctccatcatggaatcccggaatggcaccgcctcacacgacccagcaggttaaccgg
ggtagagacggtcaaagttttgggtggccacaagagaaccgtgatggctttgggcaggag
taa
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integrated database retrieval system
