Arabidopsis thaliana (thale cress): AT5G01630
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Entry
AT5G01630 CDS
T00041
Symbol
BRCA2B
Name
(RefSeq) BRCA2-like B
KO
K08775
breast cancer 2 susceptibility protein
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03440
Homologous recombination
ath03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AT5G01630 (BRCA2B)
03460 Fanconi anemia pathway
AT5G01630 (BRCA2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT5G01630 (BRCA2B)
03036 Chromosome and associated proteins [BR:
ath03036
]
AT5G01630 (BRCA2B)
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT5G01630 (BRCA2B)
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
AT5G01630 (BRCA2B)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
AT5G01630 (BRCA2B)
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
AT5G01630 (BRCA2B)
FA (Fanconi anemia) pathway
Downstream FA components
AT5G01630 (BRCA2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
831710
NCBI-ProteinID:
NP_195783
TAIR:
AT5G01630
UniProt:
Q7Y1C4
LinkDB
All DBs
Position
5:complement(234851..241106)
Genome browser
AA seq
1155 aa
AA seq
DB search
MSTWHLFSDSSGDGFRWEVAGRILQSVSDSTPTKALESTAPLPSMADLLLQGCSKLIERE
ESMPGEIPMFRTGLGKSVVLKESSIAKAKSILAENVAYSDLQNTNCSIPQTRQVDTAETM
PMFRTALGKTVPLKESSIAKPLSILGSDMIIDSDNVLPRESGFGVPNSLFQTASNKKVNV
SSAGLARAKALLGLEEDDLNGFNHVNQSSSSLQQHGWSGLKTHEEFDATVVKHHSGTPGQ
YENYVSGKRSEILNPSLKVPPTKFQTAGGKSLSVSAEALKRARNLLGDPELGSFFDDVAG
GDQFFTPQKDERLSDIAINNGSVNTGYIAHEEKTSNKHTSNSFVSPLHSSSKQFRSVNLE
NLASGGNLIKKFDTAVDETNCALNISKPATHGLSNNRPLASDMAVNNSKGNGFIPRARQL
GRPADQPLVDITNRRDTAYANNKQDSTQKKRLGKTVSVSPFKRPRISSFKTPLKKNAQQA
SSGLSVVSCDTLTSKKVLSTRYPEKSPRVYIKEFFGMHPTATTRMDYVPDHVRRIKSSNA
DKYVFCDESSSNKVGAETFLQMLAESGASLQHASRKWVTNHYRWIVWKLACYDIYYPAKC
RGNFLTITNVLEELKYRYEREVNHGHCSAIKRILSGDAPASSMMVLCISAINPRTDNGSQ
EAHCSDNCSNVKVELTDGWYSMNAALDVVLTKQLNAGKLFVGQKLRILGAGLSGWATPTS
PLEAVISSTICLLLNINGTYRAHWADRLGFCKEIGVPLAFNCIKCNGGPVPKTLAGITRI
YPILYKERLGEKKSIVRSERIESRIIQLHNQRRSALVEGIMCEYQRGINGVHSQNDTDSE
EGAKVFKLLETAAEPELLMAEMSLEQLTSFTTYKAKFEAAKQMQMEKSVAKALEDAGLGE
RNVTPFMRIRLVGLTSLSNEGEHNPKEGIVTIWDPTERQRTELTEGKIYIMKGLVPMNSD
SETLYLHARGSSSRWQPLSPKDSENFQPFFNPRKPISLSNLGEIPLSSEFDIAAYVVYVG
DAYTDVLQKKQWVFVTDGSTQHSGEISNSLLAISFSTPFMDDSSVSHISHNLVGSVVGFC
NLIKRAKDATNEMWVAETTENSVYFINAEAAYSSHLKTRSAHIQTWAKLYSSKSVIHELR
QRVLFIIGACKSPSC
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcatttattttccgattccagcggcgatggtttccggtgggaagtcgct
ggccggattcttcagtccgtctcggattctacgccaaccaaggcgctcgaatcgacagct
cctctaccttccatggccgatctcttgctccaaggatgctcgaagcttatagaacgggaa
gaatcgatgcctggggaaatcccaatgttcaggactgggctggggaagtctgtagttctt
aaagagtcttcgattgctaaagccaaatccattttagcagagaatgttgcttattcagat
ttgcagaacacaaattgctcaattccccaaacgagacaagtggatacagctgaaactatg
ccaatgttcaggacggccttggggaaaactgtccctttgaaagagtcttcaattgccaaa
cctttgtctattctaggaagtgatatgataattgactcagacaacgttcttcccagggag
agtgggtttggtgttcccaacagtctttttcagacagcttccaacaaaaaggttaatgta
tcttctgccggtttagcaagagccaaggcattgttaggactagaagaagatgatttgaat
ggatttaaccatgtgaaccagtcgtcttcttccctccagcaacatgggtggtccggttta
aaaactcatgaggagtttgatgctacagtggttaagcatcattcaggaactccaggacaa
tatgagaattatgtatctgggaagagatctgaaatcttaaatccatcgttaaaggtgcct
ccaacaaagtttcagactgctggtggaaaatcattgtcagtgtcagctgaggcgttgaaa
cgtgccagaaaccttcttggtgaccctgagttagggtctttctttgatgatgtagctgga
ggtgatcaattttttacaccacagaaagatgaaaggctaagtgatattgctataaacaat
ggaagtgtcaacacaggttatattgctcatgaagaaaagacaagcaacaaacatacgtca
aatagttttgtatctcctcttcattcatcttcaaagcaatttagatcagttaacttggag
aacctagcttcagggggtaatttgatcaagaaatttgatacggctgttgatgagaccaat
tgtgctctgaatatcagtaaacctgctacacatggactatcaaataacaggcctttagca
tcagatatggcagtgaataattccaagggaaacggtttcattccaagagctaggcaactt
ggaaggcctgctgatcagccacttgttgatataacaaatcgcagagatacagcttatgca
aacaataaacaagacagtacccaaaagaaaaggctgggaaagacagtctccgtttctcct
ttcaaaaggccaaggatttcatcctttaaaactcctttaaagaaaaatgctcagcaagct
tcaagtggtttgtctgttgtatcgtgtgatacacttacttccaaaaaggtactttctaca
agatatccagaaaagtctccaagagtatatatcaaggagttttttggaatgcatccgaca
gctacgaccaggatggattatgtgccagaccatgtcagaagaatcaaatcaagtaatgca
gataaatatgtattctgtgatgagtcttcttcaaacaaggttggagctgaaacttttctt
caaatgttggctgagtcgggtgcttccttacaacatgcatccagaaagtgggttactaat
cactacaggtggatagtctggaaacttgcatgctacgacatatactacccagccaaatgc
agaggaaactttctaacaatcaccaatgttcttgaggaactaaaatacagatatgagaga
gaggtcaatcatggtcattgctctgcaatcaagaggattctgagtggtgatgctccagct
tcttcaatgatggtcctctgcatatcagctattaatccaaggaccgataatggttctcag
gaagcacattgttctgataattgcagcaatgtgaaagtcgaactcactgatgggtggtac
tcgatgaatgctgctctggatgtcgtgctaaccaagcagctgaatgctggcaaattgttt
gtggggcagaagcttcgaatcctcggggcaggactttctggctgggctaccccaacatca
ccacttgaggcagtgatttcaagtacaatctgtttgttgttgaatattaatgggacatac
agagctcactgggcggaccgactaggcttctgtaaagaaattggtgtccctctggctttc
aactgtatcaagtgcaatgggggtccagtgcctaaaacgctagctggcatcacacgaata
taccccatcctatacaaggaaaggttaggtgaaaagaagtcaatagttcgatcagagaga
atagaaagtagaattatacagctgcataatcagaggcgctcagctcttgttgagggtatt
atgtgtgagtaccagagaggaattaatggtgttcacagccaaaacgatactgacagcgaa
gaaggagccaaggtctttaagctgttagagacggctgctgaacctgaacttcttatggct
gaaatgagcctagagcagttgacatctttcactacatataaagcaaaatttgaggcagcc
aagcaaatgcagatggaaaaatcagtggcaaaagctctggaagacgctggtttaggtgaa
aggaacgtcaccccattcatgaggattaggcttgttggcctgacgagcttaagtaatgaa
ggagagcacaatccaaaagaaggcattgtaacaatctgggatcccacggagagacagaga
accgagctgacggaggggaaaatatacataatgaaagggctagtaccaatgaactcagat
tcagaaacactttacttacatgccagagggtcaagctcaagatggcagcctttgtctcca
aaagattctgaaaattttcagccttttttcaaccctcgtaaaccaatctctttgtcaaat
cttggtgaaattcctctgtcaagtgaatttgatatcgctgcgtacgttgtatatgttgga
gatgcatacacagatgttctacaaaagaagcagtgggtgtttgtgacagatggatccaca
caacattcaggggaaatctcaaacagtcttcttgctataagcttcagcaccccattcatg
gatgatagctctgtttcccacatcagccataatttggttggatccgtggtcggattttgc
aatctaattaaaagagcaaaggatgcgacaaacgaaatgtgggttgctgagacaacagag
aactcagtctacttcataaacgcagaagctgcctactcttctcaccttaaaacccgcagt
gcccatatccaaacatgggctaagctctattcttccaaatccgtcatccatgaacttcgg
caaagagtcctatttataatcggtgcttgtaaatcaccttcatgctga
DBGET
integrated database retrieval system
