KEGG   Arabidopsis thaliana (thale cress): AT5G01960
Entry
AT5G01960         CDS       T00041                                 
Name
(RefSeq) RING/U-box superfamily protein
  KO
K28516  E3 ubiquitin-protein ligase RNFT2
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT5G01960
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    AT5G01960
SSDB
Motif
Pfam: zf-C3HC4_3 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-rbx1 zf-RING_5 Prok-RING_4 zf-RING_6 zf-C3HC4_4 RING_XB3-XBAT31 zf-RING_16 zf-ANAPC11 zf-RING_10 zf-Nse
Other DBs
NCBI-GeneID: 831906
NCBI-ProteinID: NP_568096
TAIR: AT5G01960
UniProt: Q8L610 A0A654FXQ0
LinkDB
Position
5:370239..372969
AA seq 426 aa
METPGASHDSFRGSPRRNSILSASNIIQAPISTLLEYSGLFRARPSPSHEAETLVSDDSS
GLSNGEVAIRIIGNTEQDAETDTNALREPGHSELLGSSATQVDPMGGASEGASQAAPGDP
AAGDAASRDSPYQRYDIQQAARWIEQILPFSLLLLVVFIRQHLQGFFVAIWIAAVMFKSN
DILKKQTALKGERHISALIGISVAFTAHVVGVYWWFRKDDLLYPLIMLPPKSIPPFWHAI
FIIVVNDTLVRQASMIFKCFLLMYYKNSRGRNYRKQGQLLTLVEYFMLLYRSLLPTPVWY
RFFLNKDYGSLFSSLMTGLYLTFKLTSVVEKVQSFFTALKALSRKEVHYGSYATTEQVNA
AGDLCAICQEKMHTPILLRCKHMFCEDCVSEWFERERTCPLCRALVKPADLKSFGDGSTS
LFFQIF
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggaaacgcccggcgccagtcatgattcatttaggggttctcctcgtagaaactccatc
ctctctgcttctaacatcatccaggcccctatttctaccttgttagagtattcgggtctc
tttcgagctaggccaagtcctagtcatgaggctgagacgcttgttagtgatgattcttca
ggactctccaatggggaggttgccattaggatcattggcaacaccgagcaggatgctgaa
actgataccaatgctctgagggaacccggacactctgaactcttgggttcttctgctact
caggttgatcccatgggaggtgcttcagaaggtgcctctcaggctgctccaggtgatcct
gctgctggagacgccgcttcccgggattcgccttaccaaagatatgatattcagcaggct
gcacgctggattgagcaaattcttcccttttctttgcttctgttggttgtttttatccgc
cagcatttgcaggggttctttgtcgccatttggattgctgctgtcatgttcaagtcaaat
gatattctcaagaagcaaacagctttgaagggtgagaggcatatctcggcattaattgga
atctctgtagcatttacggcccatgttgttggtgtttattggtggtttcggaaggatgac
ctcttgtatcccttaatcatgctgcctccaaagtccataccacctttctggcatgccatt
tttatcatagtggtgaatgatacacttgtccggcaggcctcaatgattttcaagtgtttt
ttgttgatgtactacaaaaacagtaggggtcggaattatcgtaaacagggtcaattgcta
actttggttgaatatttcatgcttctgtatcgctctttactgcctacccctgtatggtac
cgtttctttttgaacaaggattatggaagcctcttctcctctcttatgacgggattgtat
cttacattcaagctcacttcagtagttgagaaggttcaatccttctttacggcattgaag
gctttgtcacgtaaagaggtgcactacggatcatatgcaactacagagcaggtaaatgca
gcaggcgacctgtgtgccatctgccaggagaagatgcacaccccaattcttcttcgctgc
aaacacatgttttgcgaagattgcgtttcagagtggtttgagagagagaggacgtgtcct
ttgtgcagggccttggtcaaaccagcagatctgaaatcattcggtgatggatccaccagc
ctcttcttccagattttctga

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