Arabidopsis thaliana (thale cress): AT5G02880 Help Entry AT5G02880         CDS       T00041                                  Symbol UPL4 Name (RefSeq) ubiquitin-protein ligase 4   KO K10590   E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26] Organism ath  Arabidopsis thaliana (thale cress) Pathway ath04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:ath00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     AT5G02880 (UPL4)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:ath04121]     AT5G02880 (UPL4) Enzymes [BR:ath01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.26  HECT-type E3 ubiquitin transferase      AT5G02880 (UPL4) Ubiquitin system [BR:ath04121]  Ubiquitin ligases (E3)   HECT type E3    AT5G02880 (UPL4) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TPR_TRIP12_N HECT ARM_ARMC5 TPR_IMB1 Motif Other DBs NCBI-GeneID:  831758 NCBI-ProteinID:  NP_195908 TAIR:  AT5G02880 UniProt:  Q9LYZ7 LinkDB All DBs Position 5:661936..669124 Genome browser AA seq 1502 aa AA seqDB search MENRGQKRMEVVEELPADKRACNSQDFRPSTSGSSVQAQANDTNPGHENVDADMDTSSSA SPSSRSDEEEQEEQDKEDSDYGSCDSDEEDPRQRVLQDYQRQRSSGDHGKLKSLLLNLTG ETDPSGQLSRLTELCEVLSFSTEESLSSVMANMLSPVLVKLAKHENNADIMLLAIRAITY LCDVYPPSVEFLVRHDTIPALCQRLLTIEYLDVAEQCLQALEKISRDEPVACLNAGAIMA VLSFIDFFSTSIQRVAISTVVNICKQLSSESPSPFMDAVPILCTLLQYEDRQLVENVAIC LTKIADQASESPAMLDQLCRHGLINESTHLLNLNSRTTLSQPVYNGVIGMLRKLSSGSAL AFRTLYELNIGYSLKEIMSTYDISHSVSSTHPINACSNQVHEVLKLVIELLPASPVEDNQ LASEKESFLVNQPDLLQQFGRDMLPVMIQVLNSGANVYVSYGCLSAIHKLTCLSKSGDIV ELLKNTNMSSVLAGILSRKDHHVIVVALQVAEVLLEKYRDTFLNSFIKEGVFFAIEALLS SDRGQQNQGSADLSQKPVTKEIVKCLCQSFERSLSSSSQTCKIEKDSVYVLATRIKEGFF GPEVFNSEKGLTDVLQNLKNLSVALSELMTVPIDAHVLHDEKFFSIWNQIMERLNGRESV STFEFIESGVVKSLASYLSNGLYQRKLSKGGPECDSLPFIGKRFEVFTRLLWSDGEATSS LLIQKLQNSLSSLENFPIVLSQFLKQKNSFAAIPNGRCTSYPCLKVRFLKAEGETSLRDY SQDFVTVDPLCYLDAVDQYLWPKVNIEPIDSVEAKDQAIECQSSQLQSTSISCQAESSSP MEIDSESSDASQLQGSQVEDQTQLPGQQNASSSETSSEKEDAVPRLLFRLEGLELDRSLT VYQAILLHKLKSESEATNDSKLSGPHNITYERSAQLGDSRENLFPPGSMEDDEYRPFLSY LFTHRLALRLKGSSHPPYDILFLLKSLEGMNRFLFHLISLERINAFGEGRLENLDDLRVQ VRPVPHSEFVSSKLTEKLEQQLRDSFAVSTCGLPPWFNDLMDSCPCLFSFEAKSKYFRLA AFGSQKIRHHPQHLSSSNVHGEARPVTGSLPRKKFLACRENILESAAKMMELYGNQKVVI EVEYSEEVGTGLGPTLEFYTLVSRAFQNPDLGMWRNDCSFIVGKPVEHSGVLASSSGLFP RPWSGTSTTSDVLQKFVLLGTVVAKALQDGRVLDLPLSKAFYKLILGQELSSFDIHFVDP ELCKTLVELQALVRRKKLFAEAHGDSGAAKCDLSFHGTKIEDLCLEFALPGYTDYDLAPY SANDMVNLDNLEEYIKGIVNATVCNGIQKQVEAFRSGFNQVFSIEHLRIFNEEELETMLC GECDLFSMNEVLDHIKFDHGYTSSSPPVEYLLQILHEFDREQQRAFLQFVTGSPRLPHGG LASLSPKLTIVRKHGSDSSDTDLPSVMTCANYLKLPPYSSKEKMKEKLIYAITEGQGSFH LS NT seq 4509 nt NT seq  +upstreamnt  +downstreamnt atggagaacagaggccagaaacgaatggaggttgtggaagagttacctgctgataagaga gcttgtaactctcaggattttagaccaagcacatccggatcatctgttcaagctcaagct aatgatacgaatccaggacatgaaaacgttgacgctgatatggatacttcttcatctgct tcgccttcgagtcgatcagatgaagaagaacaggaagagcaggataaggaggattcggac tatggatcttgcgattctgatgaggaagatccgaggcagagggtgcttcaggattaccag aggcagagatcatctggtgatcatgggaaattgaagtctcttttgttgaatttgactgga gaaactgatccttctggacagttatccaggctcactgagttatgtgaagtgttgtcattt tctactgaagaatcgctgtccagtgttatggccaacatgctatcaccggtgcttgtaaag ttagctaagcatgagaacaatgcagatattatgctcctcgcaattagagctattacttat ttgtgtgatgtttatccgccgtcagtagaattccttgtaagacatgataccattcctgct ctctgccaaagacttttgactattgagtacttggacgttgctgagcagtgtttgcaagca cttgagaaaatatcccgagatgagccggtagcctgcttgaatgctggagcaattatggca gtgctttcgtttattgatttcttctcaacaagcatacagagagtcgcaatttctactgtg gtcaatatatgtaagcagctttcttctgagtctccctcgcctttcatggatgctgttcca atattatgcactcttcttcaatatgaagatcgacagctggtcgagaatgtggctatttgc ttgacaaaaatagcagatcaagccagtgagtcaccggcaatgttggatcaactgtgtagg catggactaattaatgaatcaacacatctcttaaacttgaatagccgcactaccctatct caacctgtctacaatggtgtgattggaatgctaagaaaactatcttctggttcagcttta gctttcagaacgttatatgagcttaacattggctacagtttaaaagaaatcatgtccacg tatgacatttctcattcagtgtcttctacacatcctatcaatgcatgttctaatcaggtg catgaagtcctgaagttggtgattgagcttcttccagcttcacccgtagaggataatcag ctggcatcggaaaaggaaagttttctcgtcaatcagcctgatcttttgcaacaatttgga agagacatgcttcctgtcatgattcaggtgctaaactctggagctaacgtatatgtttct tatggttgcctatcagcaattcacaagctgacttgcttgagtaagtccggtgatattgtc gagttactgaagaacaccaacatgtcaagtgttttggctggcattctgtcaaggaaggat catcatgtaattgtagtagcactacaggttgcggaagtgcttcttgagaaatacagagat acttttttgaattcttttataaaggaaggtgtttttttcgcgattgaagcactcttaagt tctgatagagggcaacaaaatcagggatcagctgacctttcacaaaagcctgttacaaaa gagattgtgaaatgcttgtgccaatcttttgaaagatcgctatcctcttcttcacaaact tgtaagattgaaaaggattctgtctacgttcttgcaacacgtatcaaggagggtttcttt ggacctgaggtattcaactctgagaaaggcttgacagatgtcctccaaaacctcaagaac ttgtcggtagcacttagcgagttgatgactgtacccattgatgcgcatgtcctgcatgat gagaaattcttctcaatatggaaccaaatcatggaaaggctgaatggaagggaatctgtg tccacttttgaattcattgagagcggagttgtaaagtcactggcaagttatctttctaat ggactctatcaaaggaaacttagcaaagggggtcctgaatgtgatagtttaccatttatt ggtaagagatttgaggtgttcacaagattgctttggtctgatggagaggcaacttcatcc ttgttaatacagaagctccaaaattccctttcttctttggaaaacttcccaattgtccta agccaatttttgaagcagaagaactcatttgcggctattccaaatgggcgttgcactagt tatccatgcctaaaagttcgttttctgaaagcagagggggagacttctttgcgtgattac tcccaagactttgtcactgttgacccactttgctatttggatgctgtcgatcaatacttg tggcctaaagttaatatagaacctatagattctgtggaagcaaaagatcaagctatagaa tgtcaatcttctcaattgcagtcaacttcgatatcttgtcaagctgaaagctcaagtcct atggagattgacagtgagtcttctgatgcgtctcagttgcagggatctcaagtggaagat cagacgcaacttccaggacaacagaatgcttcctcctctgaaacctcctctgaaaaagag gatgcggtacctagacttttgtttcgtctcgaagggcttgaactagaccgttctttgaca gtatatcaggcgattctcttgcacaaactaaaatcagaaagtgaagcaaccaacgattcg aagctgagtggaccccacaacatcacttatgaaaggtctgcacaacttggggattctcgt gaaaatctgtttccacctggatctatggaagatgatgagtatcgcccgttcttgtcctat ttgtttactcatagacttgctttgcgcctgaaggggtcaagtcatcctccgtatgacata ttgtttcttcttaagagtctggagggcatgaacagatttctctttcacctgatttctctt gaacggattaatgcttttggtgaaggtaggctagagaatttggatgatctgagggtacaa gttcgtcctgtgccacattctgaatttgttagcagtaagcttacagagaagttagagcag cagcttcgtgattcttttgctgtgtcaacctgcggtctgccaccatggtttaatgatcta atggattcatgtccgtgtttatttagttttgaagccaagtctaaatacttccgacttgca gcctttggttcacagaaaatccgtcatcatccacagcaccttagcagttcaaatgttcat ggcgaagcgcgcccagtgactggtagtttacctcgtaaaaagttcttagcttgccgtgaa aacattctagagtctgctgccaaaatgatggagttatatggaaaccagaaggtggtcatt gaggttgaatacagtgaagaagtcgggactggtcttgggccaacactggagttctatacg cttgtcagtagggcatttcaaaatcccgatcttggtatgtggagaaatgattgtagtttt attgttggaaagccagtcgaacactcgggagttttggcatcttcttcaggactctttcca cgcccttggtcaggtacatcaactacgtcagatgtgctgcagaaatttgtcctcttgggg acagtggtagcaaaggctttacaagatggacgagtcttagaccttccactttccaaagcc ttctacaaattaattctcggacaggagttgagttcatttgacatccacttcgttgaccct gaactttgtaaaacactggtggaattgcaagctctggtacgtaggaaaaagcttttcgct gaagcacatggtgattccggagcagccaagtgtgatttaagtttccatggaacaaagatt gaggacctttgtcttgaatttgcattgcctggctacacggattatgatctcgctccctat tctgcaaatgatatggtaaatttggataacctcgaggaatatatcaagggtattgtcaat gccacagtatgtaatgggatccaaaaacaagtggaagcatttcggtctggatttaatcag gttttctctattgaacatcttcggatattcaacgaagaggagctggaaactatgctgtgt ggagaatgtgatctctttagtatgaatgaagtcttggatcacatcaagtttgatcatgga tatacttctagcagcccaccagttgaatatttattgcagattctgcatgagtttgatagg gagcaacaacgagcctttttgcaatttgtaacaggatctccccggttacctcatggtggt ttggcgtctctcagtcccaaactaacaatcgtccgcaagcatggtagcgattcttcagat actgacctccctagtgtgatgacatgcgccaattatctgaagcttcctccttattcatcc aaagagaagatgaaggagaagctgatttatgccataacggaaggtcaaggttccttccat ctctcttaa

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