Arabidopsis thaliana (thale cress): AT5G03450
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Entry
AT5G03450 CDS
T00041
Name
(RefSeq) Transducin/WD40 repeat-like superfamily protein
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT5G03450
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
AT5G03450
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
AT5G03450
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-ANAPC11
Cnn_1N
Beta-prop_NOL10_N
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
831835
NCBI-ProteinID:
NP_195965
TAIR:
AT5G03450
UniProt:
Q9LZE2
A0A178UTY9
LinkDB
All DBs
Position
5:complement(858735..862345)
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AA seq
630 aa
AA seq
DB search
MPPRRSYPFSGHGGTIARFIEFGEAFGHYGEEEDEEEEDEEEAYVDYGEVQEEDEEEEEE
EDSERQTREYIDVLDSPVRVSQNESEGIENQNRSQGVCSSSSGSQEDVEWKQGDTEGLSC
SICMEVWTSGGQHQVCCLPCGHLYGYSCINKWFQQRRSGGKCPLCNKICSLRDVRKIYAS
RVAAVDDEAHKRILFLEAKLRSIEQKTASWSNKEVQWKITEAELRLEVTKLKKKIANMES
TTKGSQSQSNVASQEKYIPAHNIYQEHHGQSPSCSFRHQGDLLINGGRIFDIDGGRQILL
YARRLSGVGGTFVLTQMSLHSPCEIDDILLPRTTRAIKDLHLSPHNNGLAVFGSLGKKLS
VISLESHNTVLSYDLPAAPWSCSWDLKSSHHIYAGLQNGMVLIFDMRQTTGPFASMTGLT
TNPVHTVHHLSGNSTPTSDVRTLLSASSIGLCQWNISGSEGSPSLVSETGNPGVCISSSY
CPRSNHIVASYRPRVGSSDDTVPTQPSLTQTGVSNSNSNGVDGFHVCHKRRGVDSYYQKL
SSTQAIVDPIRLPRTAIIDFGGERKQLFASCDESTRELILQDPSTFTISQRLPLSSHLPL
QDVKYCHVNGSDLLGLLTDDRLQILRNESP
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctcgccggagttaccccttcagtggtcacggaggtacaattgcacgattcatt
gaatttggggaagcatttggacactatggagaagaagaagacgaagaagaggaagacgaa
gaggaagcatatgtcgactatggtgaagtacaagaggaagacgaggaggaagaggaggaa
gaagattccgaacgccaaaccagggaatacatcgatgtcctagactcacctgttagggtt
tcacagaacgagagtgaagggatagagaatcagaataggtcacaaggtgtttgttcatcg
tcttccggatcgcaggaggatgtcgaatggaaacaaggtgacactgagggattgtcttgt
tctatctgtatggaagtttggaccagcggtggccaacaccaagtctgttgtcttccctgt
ggacacttgtatggatattcctgcatcaacaagtggtttcagcagcgacgaagtggaggg
aagtgtcccctgtgcaacaaaatatgtagcttgagagatgtccggaaaatctatgcatca
cgggttgctgcagtagatgatgaagcacacaagagaatcttatttctggaggccaagtta
aggtcaattgaacagaagactgcgagttggagtaacaaagaagttcaatggaaaataact
gaagctgagctacgattagaagttactaagctgaagaagaaaatagctaatatggaaagt
acgactaagggttcgcaaagccagtctaatgtggcttctcaggagaaatatatacctgct
cataatatctaccaagagcatcatggacagtcaccttcttgcagcttcagacatcaggga
gatctgctaataaacggtggccgtatatttgacatagatggtggtagacaaatattatta
tatgcccgtaggctctcaggcgttggtggaacgtttgtgcttacgcaaatgagcctacat
tcgccttgtgagattgatgatattttgttgcctcgtaccactagagcaattaaagatctt
cacctttcccctcacaataatgggcttgcagtatttgggtctctaggaaaaaaattatct
gttataagcttggagagccacaatactgtcttatcttatgatctaccggctgcaccttgg
tcttgctcgtgggatctcaaaagctctcaccatatttatgctggactacaaaatggaatg
gttttgatatttgacatgcgtcaaaccacgggacctttcgcatcgatgacaggcttaaca
accaatccagttcatactgtccatcatctctctggcaattccactccaacttctgatgtc
cgtaccctcttatctgcttcttccatcgggctgtgtcagtggaacattagtggtagcgag
ggaagcccatcattagtttcggaaacgggaaacccaggtgtatgcatatcctcctcgtac
tgtccccgcagcaatcatatagtagcttcttatagaccaagagttggatcatctgatgat
acagtcccgactcagccctcattgactcaaacaggagtcagtaatagtaatagtaatggt
gtagatggatttcatgtttgtcacaagagaagaggtgttgattcgtattaccagaaacta
tcctccacacaagctattgtagatcccatccgtttgccaagaacagcgattatagacttt
ggtggggaaaggaaacaactttttgcatcttgtgacgagtccactcgggagctcatcttg
caagatccttcgacttttactatttctcaacggttgccattgtcaagtcatcttccgctt
caagatgtgaaatactgtcacgtcaatggttcggatctgctcggtctcttaacggatgat
agattgcagattcttaggaacgaatctccatga
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