Arabidopsis thaliana (thale cress): AT5G06140
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Entry
AT5G06140 CDS
T00041
Symbol
SNX1
Name
(RefSeq) sorting nexin 1
KO
K17917
sorting nexin-1/2
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
AT5G06140 (SNX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT5G06140 (SNX1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ath04990
]
AT5G06140 (SNX1)
Membrane trafficking [BR:
ath04131
]
Endocytosis
Macropinocytosis
Sorting nexins
AT5G06140 (SNX1)
Domain-containing proteins not elsewhere classified [BR:
ath04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
AT5G06140 (SNX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
Motif
Other DBs
NCBI-GeneID:
830501
NCBI-ProteinID:
NP_196232
TAIR:
AT5G06140
UniProt:
Q9FG38
A0A178UD05
LinkDB
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Position
5:complement(1855995..1858903)
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AA seq
402 aa
AA seq
DB search
MESTEQPRNISGSMQSPRSPSSHPYLSVSVTDPVKLGNGVQAYISYRVITKTNLPEYQGP
EKIVIRRYSDFVWLRDRLFEKYKGIFIPPLPEKSAVEKFRFSAEFIEMRRAALDIFVNRI
ALHPELQQSEDLRTFLQADEETMDRFRFQETSIFKKPADLMQMFRDVQSKVSDAVLGKEK
PVEETTADYEKLKHYIFELENHLTEAQKHAYRLVKRHRELGQSLLDFGKAVKLLGACEGE
PTGKAFSDLGTKSELLSIKLQKEAQQVLMNFEEPLKDYVRYVQSIKATIAERGTAFKQHC
ELSETTKLKEINLDKLMLTRSDKVGEAEIEYREIKAESEEATRRFERIVKRMEDEIVRFQ
EQKTEEMGVAFHQFAKGQARLANSVADAWRSLLPKLEASYSV
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggagagcacggagcagccgaggaacatctccggatcgatgcagagccctagatctccg
tcttcgcatccgtatctgtcagtctccgtcacagatcctgtcaaattaggcaatggcgta
caagcttatatctcttacagagttatcaccaagactaacttgccggagtaccaaggaccc
gagaagattgttattagacgatacagtgatttcgtctggttacgggatcggctttttgaa
aagtacaagggcattttcattcctcctcttccagagaagagtgctgtagaaaaattccgc
tttagtgccgaatttattgaaatgaggcgagcagcattggatatatttgttaatcgaata
gcattacaccctgagcttcagcagagtgaggatcttaggacctttttgcaagcagatgaa
gagacaatggacagattcaggtttcaggaaactagtatattcaagaagcctgcagatcta
atgcaaatgtttagggatgtccagtcaaaagttagtgatgctgtccttggaaaagaaaaa
cctgttgaagaaactactgctgactacgagaagcttaaacattacattttcgagcttgag
aaccacttgactgaggctcagaagcatgcgtatcgcctagtcaagaggcatagagagttg
ggtcaatcactgttggattttggcaaggctgtaaaacttcttggggcttgtgagggtgaa
cctacaggaaaagcattttccgatcttggaactaaatctgaactgttatcgattaagctc
cagaaagaggctcaacaagtcctgatgaacttcgaggaacccttgaaggactatgttcgt
tatgtacaatcgattaaggcaacaatagcagaacgaggcactgctttcaaacaacattgt
gaattgtcagaaacaacaaagttaaaagaaataaatcttgacaaactcatgctcacacgt
tcagacaaagtaggagaagctgagatcgaatacagagagataaaagcagaaagtgaggaa
gccacgagaagatttgagaggatagtaaagagaatggaagatgagatagtaaggtttcaa
gagcagaagacggaagagatgggagtggcattccatcagtttgcgaaaggacaagctcgc
ttagcaaacagtgtcgcggatgcttggagatcccttcttcccaaacttgaagcttcttat
tctgtctaa
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integrated database retrieval system