Arabidopsis thaliana (thale cress): AT5G08020
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Entry
AT5G08020 CDS
T00041
Symbol
RPA70B
Name
(RefSeq) RPA70-kDa subunit B
KO
K07466
replication factor A1
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03030
DNA replication
ath03420
Nucleotide excision repair
ath03430
Mismatch repair
ath03440
Homologous recombination
ath03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AT5G08020 (RPA70B)
03420 Nucleotide excision repair
AT5G08020 (RPA70B)
03430 Mismatch repair
AT5G08020 (RPA70B)
03440 Homologous recombination
AT5G08020 (RPA70B)
03460 Fanconi anemia pathway
AT5G08020 (RPA70B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ath03000
]
AT5G08020 (RPA70B)
03032 DNA replication proteins [BR:
ath03032
]
AT5G08020 (RPA70B)
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT5G08020 (RPA70B)
Transcription factors [BR:
ath03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
AT5G08020 (RPA70B)
DNA replication proteins [BR:
ath03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
AT5G08020 (RPA70B)
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
AT5G08020 (RPA70B)
MMR (mismatch excision repair)
AT5G08020 (RPA70B)
DSBR (double strand breaks repair)
HR (homologous recombination)
AT5G08020 (RPA70B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
830696
NCBI-ProteinID:
NP_196419
TAIR:
AT5G08020
UniProt:
Q9SD82
A0A178UED9
LinkDB
All DBs
Position
5:2571957..2575061
Genome browser
AA seq
604 aa
AA seq
DB search
MENSVTQDGIATVLANQSLDSSSVRPEIVVQVVDLKPAGNRYTFSANDGKMKIKAMLPAT
LTSDIISGKIQNLGLIRLLEYTVNDIPGKSEEKYMLITKCEAVASALDSEIKAEIKASTG
IMLKPKHEFVAKSASQIINEQRGNAAPAARMAMTRRVHPLVSLNPYQGSWTIKVRVTNKG
VMRTYKNARGEGCVFNVELTDEEGTQIQATMFNAAARKFYDRFEMGKVYYISRGSLKLAN
KQFKTVQNDYEMTLNENSEVEEASNEEMFTPETKFNFVPIDELGTYVNQKDLIDVIGVVQ
SVSPTMSIRRKNDNEMIPKRDITLADETKKTVVVSLWNDLATGIGQELLDMADNHPVIAI
KSLKVGAFQGVSLSTISRSNVVINPNSPEATKLKSWYDAEGKETSMSAIGSGMSSSANNG
SRSMYSDRVFLSHITSNPSLGEEKPVFFSTRAYISFIKPDQTMWYRACKTCNKKVTEAMD
SGYWCESCQKKDQECSLRYIMAVKVSDSTGETWLSAFNDEAEKIIGCTADDLNDLKSEEG
EVNEFQTKLKEATWSSHLFRISVSQQEYNSEKRQRITVRGVSPIDFAAETRLLLQDISKN
KTSQ
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggagaactcagtgacccaagatggtatcgcgacagtattagccaatcaatcccttgat
tcctcctctgttagacccgaaattgttgttcaagtcgtggatcttaagcctgctggaaat
cgatatacgtttagtgccaatgatggaaagatgaagattaaagcaatgttaccagcgact
ttgacttctgatatcatctctggaaagattcagaatctgggtcttattcgtctccttgag
tataccgtcaatgatattccaggcaaatcagaagaaaaatatatgcttataacaaaatgt
gaggctgttgcttctgcacttgactcagagattaaggcggagattaaagcttccacaggc
ataatgttgaaacccaagcatgagtttgttgccaaatcagcttcacagattatcaatgag
caaaggggaaatgctgcacctgctgcaagaatggctatgaccagaagggttcatcctctt
gtgtccttgaacccttatcaaggaagttggactattaaagttcgtgtcactaacaaagga
gtcatgagaacttacaaaaatgccagaggagaaggatgtgtgtttaatgtggaactaact
gatgaggaaggaacacagattcaggcaacaatgtttaacgcagctgcaaggaagttttat
gacagattcgagatgggaaaggtgtactatatatccaggggatcacttaagcttgctaat
aagcagttcaagacggttcagaacgattatgagatgaccctaaatgagaattctgaggtt
gaagaagctagtaatgaagaaatgtttacccctgaaactaaattcaactttgtacccatt
gatgagttgggtacatacgtgaatcagaaagaccttattgatgttatcggtgttgttcaa
agtgtttctcctaccatgagcattagaaggaagaacgacaatgagatgatcccaaagaga
gatataactttggctgatgagacaaagaaaactgttgtggtgtccctttggaatgatcta
gcaactggcattggccaagaactgctggacatggctgataatcaccctgttatcgcgatt
aaatctcttaaagttggagcttttcaaggtgtttcattgtctactatcagcagaagcaat
gtggtgataaaccctaattctccagaagctacaaagttgaaatcttggtatgatgctgaa
gggaaagagacatctatgtctgctattggttctgggatgagttcttctgccaacaacgga
tcaagatccatgtattctgacagagtttttctttctcacatcacaagcaatccctcttta
ggcgaggagaagcctgtattcttcagcactagagcttacataagcttcatcaagccagac
caaacaatgtggtaccgtgcttgcaagacctgtaacaagaaagttactgaagcaatggac
tctggttattggtgtgaaagttgtcagaaaaaggaccaagaatgcagtttaaggtatata
atggcggtgaaagtctccgactcaactggtgaaacttggttatctgcattcaatgatgaa
gcagagaagattatcggctgcacagctgatgatctcaatgatctaaaatcagaggaaggt
gaagtgaatgagtttcagacaaaactgaaagaagctacttggtcatctcatctcttccgg
attagtgtttctcagcaagagtataacagtgagaagagacagaggataactgtaagaggt
gtttctccaattgactttgctgctgaaacaagattattgctccaagacatttccaagaac
aagacatctcagtaa
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integrated database retrieval system
