Arabidopsis thaliana (thale cress): AT5G08110
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Entry
AT5G08110 CDS
T00041
Name
(RefSeq) UBQ, helicase-c and DEAD-like helicase domain-containing protein
Organism
ath
Arabidopsis thaliana (thale cress)
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Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
MZB
WHD_HRQ1
Helicase_C
ResIII
Rad60-SLD
ubiquitin
DUF2604
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
830705
NCBI-ProteinID:
NP_001330594
TAIR:
AT5G08110
UniProt:
A0A1P8BBB3
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All DBs
Position
5:complement(2594716..2600192)
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AA seq
1144 aa
AA seq
DB search
MENERRSGGGDSVPISVRSINGESTTVQVSSDGTIRDLKKALKSCFPPASSSSNFHLYIK
GEKLKLDTRVAAITINDGDILGLFPFKKKELRQTPKPDLSKPSSLSSRTSTMKDENAKRA
EDHCVGEKRKRDEEACPYGFFNDDLESECKDAFKGQNTEKLAEVLKSRNCLTSPGSTKCL
MSWDSSSSLCSCPDWESLSRLAMSGVRVRIQDVKNLSVICPKVVKVITDDYEAVNYENAI
VIADYLEMDEKSGRKKIPLAKLFSAMKKREASFKSDFWESIRSLLNKNTGESGIAISLEG
LLKFASEGRADGGNEARQAGKGTCPTSGSRKFQTLCHATNSLLPSEMVEHLRNGIGSKGQ
VVHVEVIKARKSAYVEMSDKLSETTKSALKRIGLNTLYSHQAEAISAALAGKNVAVATMT
SSGKSLCYNVPVFEELCKDTNSCALYLFPTKALAQDQLRALSDLIKGFEASINMGVYDGD
TPYKDRTRLRSNARLLITNPDMLHISILRRHKEQFSRILSNLRYIVIDEAHIYKGPFGCH
MALILRRLRRLCSHVYGVNPSFIFCTATSANPREHCMELANLSELELVTIDGSPSSEKLF
VLWNPSAPPTSKSEKSSKVVSSSEAAADKPSGAAVDTLSGPASEVSHLFAEMVQHGLRCI
AFCPSRKLCELVLCLTREILAETAPHLVEAITSYRGGYIAEDRRKIESDLFGGKLCGIAA
TNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRSGRRQKPSLAVYVAFLGPLDQYYMSF
PDKLFGSPIECCHIDSQNKHVLMQHLACAALEHPLSLQYDQQHFGSGLSDPLAELRNKGF
LSFDPSRDSSSRIWNYIGREKNPARIVSIRAIETVRYRVMEKKSKDVLDEIEESKAFFHV
YEGAIYMNQGRNYLVTSLDIKEKVALCELVNVDYYTRTRDYTDIKVTGGDTAYPVKAPKK
PTPQTHACRVTTKWFGFLRIRRRNNEVIDDVELSLPSYTYQSQAVWIQVPMSVKLAVETA
NLPFRAGLHAACHALVNVVPTRVTCNYSDIAPECPNPQEQRYFPARILVYDRHPGGTGIS
AKICPLFFELLKDARDLLRSCEKCPPETGCPKCAQTFGCRGYNELLHKKAAIMIMQGVLD
AKED
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgagagacgcagcggcggaggagacagtgttccgatctctgtccgaagcatt
aacggcgaatcgacgaccgttcaggtttcctctgacgggacaattcgtgacctaaagaaa
gccctaaaatcctgtttccctcccgcttcctcttcttccaatttccatctgtatatcaag
ggtgagaaattgaaattggacactagagtggctgcgattactattaatgacggtgatatc
ttgggtttatttccgtttaagaagaaggaacttcgacagactccaaaacctgatttatca
aaaccttcctccttgagttcaagaacctcaactatgaaagatgaaaacgctaaaagagct
gaggatcattgtgttggtgagaaacgaaaacgggatgaagaagcgtgtccatatggattc
tttaatgatgatttggagtctgagtgtaaagatgcattcaagggtcagaacacagagaag
cttgctgaggttttaaagtccaggaattgcttgacatctccaggttctacaaaatgcttg
atgtcatgggattcaagtagctctttgtgttcttgtcctgattgggaatctctttcccgg
ttagctatgtctggagttcgtgttcgtatacaagacgttaagaatctctctgttatatgc
cccaaggtagtaaaggttatcactgatgactatgaggctgtgaactatgagaacgctata
gttatagctgactatctggagatggatgaaaaatcaggtcgtaaaaaaattcctcttgca
aagctctttagtgccatgaaaaaacgggaggcttcctttaagtctgatttctgggagtcc
atcagatcgctactgaacaaaaatacaggtgagagtggaatagctatttccttggagggc
ttgcttaaatttgccagtgaaggaagagctgatggtggaaacgaagctagacaggctggg
aaaggcacttgtcctacctctggttctcgtaaattccagactttgtgtcatgccacaaat
tcactgctaccatcggagatggttgaacatctcaggaatggtattggatctaaaggacag
gtagttcacgttgaagttatcaaggccagaaaatctgcctacgtcgaaatgtcagataag
ctctcggaaaccaccaagtctgccttgaaacgaattggtctcaacacattatacagccat
caggctgaagcaatttcagcagccttggctggaaagaatgttgcggttgcaactatgact
tccagtggaaaatctctttgctataacgtgccagtctttgaggaattgtgcaaagataca
aattcttgtgccttgtacttatttccgaccaaggccttagctcaggatcaattaagagca
ttgtctgatttgataaaaggattcgaagcaagcataaacatgggtgtatacgatggtgat
actccttacaaggatagaacaaggctgaggagtaatgctagactgctgatcacaaatcct
gatatgttacatatatcaattttgcgtcgccataaagaacaattcagccggattttatct
aaccttaggtacattgtgattgatgaagcccatatttacaaaggaccatttggctgccac
atggcccttatattgagaagacttcgccgcctgtgctctcatgtatatggtgtcaatcct
tctttcatattttgcactgcaacttctgctaatcctcgagaacattgcatggagcttgca
aacctatctgagctcgagctggtaacaatagatggaagtccttcctctgaaaagcttttt
gtcttgtggaatccatcagctcctccaacaagtaaatctgaaaaaagttcaaaagtcgtg
agtagtagtgaagctgctgcagataaaccatctggagctgctgtcgatacactatcaggc
ccagcttctgaagtttcacaccttttcgcagagatggttcagcatggattacgttgtatt
gctttttgtccatctcgcaaactctgtgaacttgttctgtgtttgacacgtgaaattcta
gctgagactgcccctcatctggttgaagccataacctcatatcgtggaggctacattgct
gaggaccggaggaaaatagagagtgatttatttggtggaaagctttgtggcattgctgca
acaaacgcacttgagttggggattgatgttggtcacatcgatgtaactcttcatttaggt
tttcccgggagtattgccagtctttggcagcaagccggtcggtctggaaggcgacaaaag
ccctctcttgctgtatatgttgcctttctcggcccgcttgaccaatactacatgagcttt
ccggacaaactctttggtagcccaattgagtgttgccatattgattctcaaaataagcat
gtccttatgcaacatttggcttgtgctgctcttgagcatccgttgagcttacaatatgat
caacagcactttggttctggcttaagcgaccctcttgctgagctcaggaacaaaggattc
ttgagttttgatccatcccgtgattcttcttctagaatatggaactatattggtcgagag
aaaaatcctgcgaggatagtctctatacgggccatagagacagtaagatacagagtcatg
gaaaaaaaaagtaaagatgttctcgatgaaatcgaggaaagcaaagcgtttttccacgta
tatgaaggagctatttatatgaaccaaggaaggaactacctggtcacgagtctggatata
aaagaaaaggtagctctgtgtgaactagtaaacgtggattactacaccaggactcgggat
tacactgatatcaaagtaactggtggtgacactgcttacccggtcaaggctccaaagaag
ccaacaccacaaactcatgcatgtagagtgacaacaaagtggtttggatttcttcgtatc
cgaagaagaaacaatgaagtaattgatgatgttgagctttcactcccaagttacacttac
caatcacaggctgtttggattcaagtgccgatgtcggtaaaactagcagtggagacggca
aacttgccattccgtgctggtttacacgcagcttgtcacgcccttgtcaacgttgttcca
acaagagtgacatgcaactattcagacatagctccagaatgtccaaatccgcaagagcaa
cggtatttcccagcaagaatcttagtatatgatcgtcatcctggaggaactggcatatcc
gccaagatctgtccgctcttctttgagcttctaaaagatgctcgtgatctcttaaggtct
tgcgaaaaatgcccacctgaaactggttgccccaagtgcgctcagacttttggttgccga
gggtacaatgaactcctacataagaaagcagccatcatgatcatgcagggcgttttggac
gcgaaggaagattga
DBGET
integrated database retrieval system
