Arabidopsis thaliana (thale cress): AT5G08420
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Entry
AT5G08420 CDS
T00041
Name
(RefSeq) RNA-binding KH domain-containing protein
KO
K06961
ribosomal RNA assembly protein
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ath03009
]
AT5G08420
Ribosome biogenesis [BR:
ath03009
]
Eukaryotic type
90S particles
Other 90S particles
AT5G08420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_KRR1_2nd
KH_KRR1_1st
Motif
Other DBs
NCBI-GeneID:
830741
NCBI-ProteinID:
NP_196459
TAIR:
AT5G08420
UniProt:
Q9FT93
A0A178UIZ9
LinkDB
All DBs
Position
5:2713347..2716328
Genome browser
AA seq
391 aa
AA seq
DB search
MAEVEEIAHEEQNIEKREKKKGKHEKPKPWDDDPNIDRWTIEKFDPAWNPTGMTETSTFS
TLFPQYREKYLQECWPRVESALKEYGVACKLNLVEGSMTVSTTRKTRDPYIIVKARDLIK
LLSRSVPAPQAIKILEDEVQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKALEILTNC
YILVQGSTVAAMGPFKGLKQLRRIVEDCVQNIMHPVYHIKTLMMKKELEKDPALANESWD
RFLPTFRKKNVKQKKPKSKEKKPYTPFPPPQPPSKIDMQLESGEYFMSDKKKSEKKWQEK
QEKQSEKSTENKRKRDASFLPPEEPMNNNSNANKSEDGKNDITELTNSLKSKTKELKKQK
KTHERVNAEEYIAGPSSSADKSSKKSKKIRD
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggtggaggagattgcgcacgaggagcagaatatcgagaagagggagaagaag
aaaggtaaacacgagaagccgaagccatgggatgatgacccaaacatcgaccgttggaca
atcgagaagtttgatccggcatggaaccccactggtatgactgaaaccagcacgttctca
acactctttcctcaatacagagagaagtatcttcaggagtgttggcctagagttgaatct
gctcttaaggagtacggtgtcgcctgcaagctcaacttggttgaaggttctatgactgtt
tcgacgacgaggaagacaagagatccatacatcattgtcaaagctagggatttgattaag
cttctttccagaagtgtccctgctcctcaggcaattaagattctcgaagatgaggtgcaa
tgtgatatcatcaagatcggtaacttggttagaaataaggaaagatttgttaaaagaagg
cagcggcttgtgggtcctaattcttctaccttgaaggcgctggaaatattaaccaactgt
tacattctagttcagggaagtactgtagccgctatgggtccatttaaaggtctcaaacag
ctcagaaggattgtggaagactgcgtacagaatataatgcatcctgtataccatataaag
actctcatgatgaaaaaagaactggagaaggatccagctcttgcaaatgaaagctgggat
aggtttcttcccacattcaggaagaaaaatgttaagcaaaagaaacccaaaagcaaggag
aagaagccatacacacctttcccacctcctcaaccacctagcaagattgatatgcagttg
gagtctggagaatacttcatgagtgataaaaagaagtcagagaaaaaatggcaggagaag
caagagaaacagtcagagaagagcacagagaacaaaagaaagagagatgcctcattcctc
ccacctgaggagcctatgaacaacaatagcaacgcaaacaaatcagaggatggaaagaat
gatataaccgagttaacaaattccttgaagagcaagacgaaggagttgaaaaagcagaaa
aagacacacgagagagtgaatgcggaggagtatattgctggtccatcttcttctgctgat
aaatcttccaagaagtccaaaaagattagagattaa
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