Arabidopsis thaliana (thale cress): AT5G08565
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Entry
AT5G08565 CDS
T00041
Name
(RefSeq) Transcription initiation Spt4-like protein
KO
K15171
transcription elongation factor SPT4
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
AT5G08565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT5G08565
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT5G08565
Transcription machinery [BR:
ath03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
AT5G08565
RNA polymerase I system
AT5G08565
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
AT5G08565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
830757
NCBI-ProteinID:
NP_568201
TAIR:
AT5G08565
UniProt:
Q8LCQ3
A0A178UPE0
LinkDB
All DBs
Position
5:2775897..2777474
Genome browser
AA seq
116 aa
AA seq
DB search
MGEAPAQIPTSFGHELRACLRCRLVKTYDQFRDSGCENCPFFKIEDDHERIVDVTTPNFN
GIISMMDPRRSWAARWLRIGKFAPGCYTLAVSEALPEEMQFICQQARVQYVPPKRI
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagcgcctgcccagattccgacgagtttcggccacgagcttagggcttgtctt
cgatgccgcctcgtcaagacctacgatcagtttagggattctggatgcgagaactgtcct
ttcttcaaaatagaagacgatcatgaacgcatcgtcgatgttacaactcccaacttcaat
ggtataatctctatgatggatccacgcagaagttgggcagcaagatggttaagaattggg
aagtttgctcctggttgctacactcttgctgtctcagaggcactcccagaggaaatgcag
ttcatatgccaacaagcacgggtgcagtacgttccacccaaacgtatttga
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integrated database retrieval system
