Arabidopsis thaliana (thale cress): AT5G08600
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Entry
AT5G08600 CDS
T00041
Name
(RefSeq) U3 ribonucleoprotein (Utp) family protein
KO
K14567
U3 small nucleolar RNA-associated protein 14
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AT5G08600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ath03009
]
AT5G08600
Ribosome biogenesis [BR:
ath03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
AT5G08600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp14
Motif
Other DBs
NCBI-GeneID:
830761
NCBI-ProteinID:
NP_001190265
TAIR:
AT5G08600
UniProt:
F4KB50
LinkDB
All DBs
Position
5:2786177..2790241
Genome browser
AA seq
845 aa
AA seq
DB search
MGGGEKRKSSFKNLANAKKRRTGPHLPSSILKTIANEKRPLNSDEGDDEIDSAYGDFYEY
EEGVPEEESRKNNRYERVVNYEFELAEDCEVKTCFKLSLFQPKDENVESEDDDDDDDDDD
DDRHSRMLKNVTELPISAFQGESKNKRVVFTEPYPESEFNPTRDVLEGKSLTTIDDFMEP
LQGLHGNSQLSNMISRMRKDTQSLVHAPLPKPEQERLERDVANELVYKGFDIWVPLVKRN
REAPTIYFNQDVNVGYSTVGAIASQFHPRTEFEMKMASLLDDHEILEAHKEDGARLLEFN
EVSMEDHIKRRNHVAKMRSMLFRVDLKHKRIKQIKSKTYHRLKNKDLNQSGVGAFMEPAM
AKEEAKKQEARRVKERMTLKHKNTGQWAKRMLSRGLNRKYDVTQAALSKQLQIHATLSRK
MNSTKDESSSDEEDLNDGSDQDTSKLIAEAKEKILKTVDDDEVPISRLMSLPFMARAVKK
KNEEAKEEGKRDIEELEKFGGAETSKKSTNVVGRRVFGAEAPKESEKESDNLFDNSDSSD
NDMEDNELEAVKDNASPARNTETIMEAEKLDDIAGNPASKTTFDVALYASGSWKKMTGCK
NAESKKASKTHVPISQSQDKKESSDSESDDSESDDSESEAEQMVDGILTCGSKETYEIPC
QAELVSRAFAGDDVEGDFEKDKQEVLNQEVPEPEKPVQVAGWGHWTNNQNKRGLPSRIVR
EHEEAKKTREQALRKRKDASFKHVIISEKVDKKAEKLQTKSLPYPYTSKEVFEQSMRMPI
GPEFNPTTIVGVLNRPEVVKKAGVIIKPVKFEEVNPNDEHPRSHQKQKPKKKGALKLNTR
QRVIQ
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaggagagaagaggaaatctagtttcaaaaacctagctaatgcaaagaagagg
agaacaggacctcacttacctagctcaatactcaagaccattgcgaatgagaaacgtcct
ttgaactctgacgaaggagacgatgagattgattctgcttacggtgatttttacgagtac
gaagaaggtgtgcctgaagaggaatctaggaaaaacaaccgctacgaacgcgtcgttaac
tacgaattcgagcttgcagaggattgcgaggttaaaacttgttttaaattgtctcttttt
caaccaaaggatgaaaacgtggagtcagaagatgatgatgatgatgatgatgatgatgat
gatgataggcactcacgaatgttgaaaaatgtcactgaattgccaatttcagcctttcaa
ggagagagtaagaacaaacgtgtagtctttactgaaccatatccagagtctgaattcaat
cctacccgtgatgttctggagggtaaatccctcaccacaattgatgactttatggagcct
cttcaaggattacatggaaatagccaactaagcaatatgatctcccggatgcgaaaagat
acgcagtctcttgttcatgctcctctgccaaagccagaacaagaaagactggaacgggat
gtagcgaatgaactggtttacaaggggtttgatatttgggtgcctctggtaaaaaggaac
agagaggcaccaactatttactttaaccaagatgtcaatgttggatactctaccgttggt
gctatagcatcacaatttcatcccaggactgaatttgagatgaaaatggcttctctactc
gatgatcatgagattttggaggctcacaaagaagatggagctaggcttcttgaattcaac
gaggtatctatggaagatcacatcaagagacgtaaccatgttgctaagatgcggagcatg
ctcttccgagttgacctgaaacataaacgaatcaagcagattaagtctaaaacatatcat
cgccttaaaaacaaagacctgaatcaatcgggtgttggagcattcatggagccagcaatg
gctaaagaagaggctaagaagcaggaggcgaggcgagtaaaggaacgtatgactttaaag
cacaaaaacacaggacaatgggccaaacgcatgctaagccgtggactgaataggaaatac
gatgtgactcaggcagctctatctaaacaacttcaaattcatgctactttgtccagaaag
atgaactccacaaaagatgaaagtagtagtgatgaggaagatttgaatgatggttcagat
caggatacttctaaactgatagcggaagcaaaggagaagatactgaaaactgtggacgat
gatgaagtccccatttctcgtcttatgtcattacctttcatggctcgtgctgtgaaaaag
aaaaacgaggaagctaaagaagaaggtaaacgtgatattgaggagttggagaaatttggt
ggagcagaaacctctaaaaagtccactaatgttgttggtagaagagtatttggtgcagaa
gctccaaaagagtctgaaaaggaatcagacaacctttttgataacagtgatagtagtgac
aatgatatggaagataatgagttagaggctgtaaaagataatgcttcacctgctagaaac
actgaaaccattatggaagccgagaagttggatgatattgctggaaacccagcatctaag
acaacatttgatgtcgccttatatgcatcaggctcctggaagaagatgacaggctgcaaa
aacgcagaatccaaaaaagcttcaaagacgcatgtgcccatttcgcagtcccaagataaa
aaggaatcgagtgattcagaaagtgatgattcagaaagtgatgattcagagagtgaagca
gagcaaatggttgatgggattttgacatgcggttcaaaggaaacgtatgaaattccttgt
caagcagagcttgtaagccgtgcttttgctggtgatgacgttgaaggtgactttgagaag
gataagcaagaggtactaaatcaggaagttcctgaacccgagaaaccggttcaagttgct
ggttggggacattggaccaataaccaaaacaagagaggtttaccatcaaggattgttaga
gaacacgaagaagccaagaaaacgagagagcaagctctcagaaaaaggaaagacgcttct
ttcaaacatgttatcatatcagaaaaagttgataaaaaggctgagaaacttcagacaaag
agtctaccttacccttacacatcaaaggaagttttcgaacaaagtatgcgtatgcctata
ggacctgagtttaatcccacaactattgttggagttctaaaccgacctgaggttgtgaag
aaagctggagtgatcattaaacctgtcaagtttgaggaagtaaatccgaatgacgaacac
cctcgtagccatcagaaacaaaaacccaagaaaaaaggtgctttaaaattgaacactcga
caaagggtaattcagtaa
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