Arabidopsis thaliana (thale cress): AT5G09560
Help
Entry
AT5G09560 CDS
T00041
Name
(RefSeq) RNA-binding KH domain-containing protein
KO
K21444
poly(rC)-binding protein 3/4
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT5G09560
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
AT5G09560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
Lipin_mid
Cas_Cas1
Motif
Other DBs
NCBI-GeneID:
830815
NCBI-ProteinID:
NP_001318518
TAIR:
AT5G09560
UniProt:
F4KDY1
LinkDB
All DBs
Position
5:2967170..2969491
Genome browser
AA seq
600 aa
AA seq
DB search
MEGKKFGAQSTARAPLPLPQPPSAPPPEYVTFRILCNVSQAGHVIGKHGGMVKKLHKSTE
SSIWVEKTPLDDSPYRIIKIFGHVGSVSRVKLGVIVNNVSNREKKEQEQEVEVSRAQYAL
IRVFEALNFGDCTSSTVSCNLLMEGSHVVTVIGKNGELMQRILEETGCNVQLRSHDLSIC
TNPGDVVLKIEGNRLSAVMKALVSISSRLQACPPISTASLHAEAVPDALRRPMEYRSQQY
REVDPHGSLHRHVEISQEDALVRPFFRTITQPRIDYLPHPSYDHRLITSASKNPPVTIKQ
PLQASKDDIRQVDLKILCSNESASVVIKTRSVTDASISVGDRHPDCDERLVTITAFEKTK
DITSESQRALVLVFSNMYENATAKVLDSGLTSSITARLVVRSNQINCLLGEEGRIKTTIQ
QRTGAFITVLNVEQNPKCVSENNQVVQISGEFPNVREAINQVTSMLREDLINQSFQRGSQ
YAVNYSEDPFPELFSPTAGYTPTFGRSSTMDPNDIFHYSSQASSRLWESPPPAAPRSVND
GSGGLFSTRDDLVLTSGLKTVRYRVSEYDVCSMFGYGKDGHNRLLKSLREVIVHIYILFT
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggagggaaagaagtttggagcgcagtctaccgctcgtgcgccactgccactgccacag
ccgccatcagcaccgccgccagaatacgtaacgtttcgcattctctgcaacgtgtctcag
gccgggcatgtgatcgggaaacatggaggaatggttaagaagcttcataaatcaacagaa
tccagtatctgggtcgagaagactcctcttgatgattctccgtaccgtatcatcaagatt
ttcggtcatgtaggttcagtgtctagggtgaaattaggtgttattgttaataacgttagc
aacagggagaagaaggagcaagaacaagaagttgaagtctccagagcacaatacgcgttg
attagggttttcgaagctctaaatttcggagattgcactagtagtaccgtctcctgtaat
ctgttgatggaagggagccatgtggttactgtgataggtaagaatggtgaattgatgcag
aggatattggaagaaactggttgtaatgttcaactacgttcacatgatttgtcaatttgc
acaaaccctggtgacgtagtgctcaagatcgaaggaaatagactttctgcagtgatgaag
gcactagtatccatatccagtcgcttgcaggcttgtccgccgatttctacggcgtctttg
catgctgaggcggttcctgatgctctacgcaggcctatggaatacaggtcacaacagtat
agggaagttgatcctcatggttccttgcatagacatgttgagatcagtcaagaagatgct
ctggttaggcctttttttagaacaatcactcagccaaggatagattatcttccgcaccca
agttatgatcacagactcattacctctgcttcaaagaatccccctgtcaccattaagcag
ccactccaagcatcaaaggatgatatccgacaagtggatctgaagatactttgttcaaac
gaaagtgctagtgtagttatcaagactcgaagtgtgacagatgcttctataagtgtggga
gatagacatcctgactgtgatgaacgcttagttacaattacagcatttgagaaaaccaaa
gacataacctccgaatcccagagagctttagttcttgttttctctaacatgtatgagaat
gccactgcaaaagtcctagatagtggcttaacgtcatctatcactgcacggcttgtggtc
cggtcaaatcagattaattgtttgctgggagaagagggtcgtataaaaactacaattcag
caaagaactggtgcttttataactgtattgaacgttgagcagaacccaaaatgtgtttca
gagaacaatcaagttgtgcagatttcaggagagttcccaaatgtgagagaagctataaac
caagttaccagcatgctacgagaggatcttatcaaccaatcgttccaaagggggtctcaa
tatgcagttaactattcagaagatccatttcctgaattgttcagtcctactgctggatat
actccaacttttggtcggtcttccactatggatcctaatgatatcttccattactctagt
caagcttcatctaggttgtgggaatcaccgccacctgctgctccaagaagtgtaaatgat
ggaagtggaggattattttctacaagagatgaccttgtacttacaagtggactcaaaact
gtgcgatatagagtttcagaatacgatgtgtgctctatgtttggatatggaaaggatggt
cacaatcgtctactgaagagtctgagagaggtaatagtacacatatatattctgtttact
tga
DBGET
integrated database retrieval system
