Arabidopsis thaliana (thale cress): AT5G09660
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Entry
AT5G09660 CDS
T00041
Symbol
PMDH2
Name
(RefSeq) peroxisomal NAD-malate dehydrogenase 2
KO
K00026
malate dehydrogenase [EC:
1.1.1.37
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00020
Citrate cycle (TCA cycle)
ath00270
Cysteine and methionine metabolism
ath00620
Pyruvate metabolism
ath00630
Glyoxylate and dicarboxylate metabolism
ath00710
Carbon fixation by Calvin cycle
ath01100
Metabolic pathways
ath01110
Biosynthesis of secondary metabolites
ath01200
Carbon metabolism
Module
ath_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ath_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ath_M00012
Glyoxylate cycle
ath_M00168
CAM (Crassulacean acid metabolism), dark
ath_M00171
C4-dicarboxylic acid cycle, NAD - malic enzyme type
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AT5G09660 (PMDH2)
00620 Pyruvate metabolism
AT5G09660 (PMDH2)
00630 Glyoxylate and dicarboxylate metabolism
AT5G09660 (PMDH2)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
AT5G09660 (PMDH2)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
AT5G09660 (PMDH2)
Enzymes [BR:
ath01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
AT5G09660 (PMDH2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
3Beta_HSD
Semialdhyde_dh
DapB_N
Motif
Other DBs
NCBI-GeneID:
830825
NCBI-ProteinID:
NP_196528
TAIR:
AT5G09660
UniProt:
Q9ZP05
A0A178UMW0
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All DBs
Position
5:complement(2993411..2995784)
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AA seq
354 aa
AA seq
DB search
MEFRGDANQRIARISAHLTPQMEAKNSVIGRENCRAKGGNPGFKVAILGAAGGIGQSLSL
LMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGI
PRKPGMTRDDLFKINAGIVKTLCEGVAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGTYD
PKKLLGVTTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPSSFTPQE
IEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDANVVECSFVASQV
TELAFFATKVRLGRTGAEEVYQLGPLNEYERIGLEKAKDELAGSIQKGVEFIRK
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggagtttcgtggagatgccaaccagaggattgctaggatttcagctcatctcactcct
cagatggaggccaagaactctgtaatcggacgggaaaactgcagagctaaaggtggtaat
ccaggattcaaagtagcaattcttggagctgcaggtggaattggacaatctttatctttg
ctgatgaagatgaaccctcttgtctctttacttcatctctacgatgttgtcaatgctcct
ggcgtcactgctgacgtcagtcatatggacactggagctgttgtccgcgggttcttggga
gcgaagcagcttgaggacgcgctaacgggtatggatcttgtgatcataccagccggtata
ccgaggaaaccagggatgacccgcgatgatctgtttaaaatcaatgctgggattgttaaa
acactatgtgaaggtgtagcaaaatgttgtcctaatgctattgtcaacttgatcagcaac
cctgtgaactctactgtccccattgccgctgaggttttcaagaaagctggaacttatgat
cctaagaagctccttggagttactacactcgatgttgctcgtgccaacacatttgtggca
gaagttcttggccttgatccaagagaagtcgatgtgccagtagttgggggacacgccgga
gtcacaatcttgccactactgtcacaggttaaacctcctagcagcttcacacctcaagaa
attgagtacctgacaaaccggattcaaaatggtggaactgaagttgtggaggcaaaagct
ggagctggttctgcaacactttcaatggcatatgctgcagccaagtttgcagatgcttgc
cttcgcgggttaagaggagatgcgaatgtcgtagaatgctcttttgttgcttcacaggtg
acagaattagctttctttgcaacaaaagtgcgccttggccgtacaggagcagaggaagtg
tatcagcttggacccttaaacgaatacgaaaggattggtctggagaaagcaaaagatgaa
ttagccggaagtattcagaaaggtgttgaattcatcagaaaatga
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