KEGG   Arabidopsis thaliana (thale cress): AT5G12210
Entry
AT5G12210         CDS       T00041                                 
Symbol
RGTB1
Name
(RefSeq) RAB geranylgeranyl transferase beta subunit 1
  KO
K05956  geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:ath01006]
    AT5G12210 (RGTB1)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT5G12210 (RGTB1)
Enzymes [BR:ath01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.60  protein geranylgeranyltransferase type II
     AT5G12210 (RGTB1)
Prenyltransferases [BR:ath01006]
 Protein prenylation
  Rab geranylgeranyltransferase
   AT5G12210 (RGTB1)
Membrane trafficking [BR:ath04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    AT5G12210 (RGTB1)
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
    AT5G12210 (RGTB1)
SSDB
Motif
Pfam: Prenyltrans SQHop_cyclase_N SQHop_cyclase_C
Other DBs
NCBI-GeneID: 831094
NCBI-ProteinID: NP_568259
TAIR: AT5G12210
UniProt: Q84J75 A0A178UCS2
LinkDB
Position
5:3947022..3949866
AA seq 321 aa
MSSTSSSQMVQLVADKHVRYILMAEKKKESFESVVMDHLRMNGAYWGLTTLDLLDKLGCV
SEEEVISWLMTCQHESGGFAGNTGHDPHILYTLSAVQILALFDKINILDIGKVSSYVAKL
QNEDGSFSGDMWGEIDTRFSYIAICCLSILKCLDKINVEKAVKYIVSCKNLDGGFGCTPG
AESHAGQIFCCVGALAITGSLHHVDKDSLGWWLCERQLKAGGLNGRPEKLADVCYSWWVL
SSLIMIDRVHWIDKAKLVKFILDCQDLDNGGISDRPEDAVDIFHTYFGVAGLSLLEYPGV
KVIDPAYALPVDVVNRIIFTK
NT seq 966 nt   +upstreamnt  +downstreamnt
atgagctctacgtcttcctcccagatggttcagctcgtagctgacaagcatgtacgttac
attctgatggcagaaaagaagaaagagagttttgagtctgtggtgatggatcatctaaga
atgaatggtgcatactggggactcaccactctcgacttacttgacaagctcggctgtgtt
tctgaagaggaagtcatttcatggctcatgacttgccagcatgaatctggtggctttgcc
ggtaacactggacacgatccacatatcctatatacactcagtgctgtacaaatcttggcc
ctatttgacaaaatcaacattcttgacattgggaaagtgtcaagttatgttgctaagttg
cagaatgaagatggatccttctcaggagatatgtggggagaaatagatacgaggttttcg
tacatagctatttgctgtctctcaatattgaaatgtcttgacaaaatcaatgtggagaag
gccgttaagtacattgtgagctgcaaaaacctggatggtggttttgggtgcacacctgga
gcagagtcccatgcaggacaaattttctgctgcgttggtgctcttgctatcactgggagt
ctccatcatgttgataaggactcacttggttggtggttatgtgaaagacaattaaaggct
gggggcttaaatggacgtcctgagaaactcgctgatgtttgctattcttggtgggtccta
tcgagcctaatcatgatagatagagttcactggatcgacaaagcaaagcttgtcaagttc
attctggactgtcaggatttggacaacggaggcatctcagaccgacccgaggatgctgtt
gatatcttccacacctactttggagttgcggggctttccctccttgagtatcctggagtc
aaagtaattgatccagcctatgctttgcctgttgatgtcgtcaaccggattatattcacc
aaatga

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