Arabidopsis thaliana (thale cress): AT5G13570
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Entry
AT5G13570 CDS
T00041
Symbol
DCP2
Name
(RefSeq) decapping 2
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AT5G13570 (DCP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT5G13570 (DCP2)
Enzymes [BR:
ath01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
AT5G13570 (DCP2)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AT5G13570 (DCP2)
mRNA degradation factors
5'-3' decay
Decapping complex
AT5G13570 (DCP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
DUF5420
Motif
Other DBs
NCBI-GeneID:
831201
NCBI-ProteinID:
NP_196861
TAIR:
AT5G13570
UniProt:
Q8GW31
A0A654G0P1
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All DBs
Position
5:4367262..4370429
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AA seq
373 aa
AA seq
DB search
MSGLHRSSSSSKNIGNCLPSKELLDDLCSRFVLNVPEEDQQSFERILFLVEYAYWYYEDN
AVENDPKLKSLSLKEFTSLLFNSCDVLRPYVTHIDDIFKDFTSYKCRVPVTGAIILDETY
ERCLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVSKLLKREEYIEFVFRQQ
RVRLYIVAGVTEDTVFAPLTKKEISEITWHRLDHLQPASNEVITHGVSGLKLYMVAPFLS
SLKSWILKHPSPVARRPNKPLKALCVWNARTSVGGNGTATVESQNRKSELRTTTMESNSR
KPELKRTTMESHSTKPELRKGTMESHNTTATVESHNTKPVVDHSQDIKPGGSFINFKFNQ
SVILQALESGNSA
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcctccatcgatcatcaagttcatcgaagaacatcggaaattgccttccctcc
aaagaactccttgatgatctttgcagtcgatttgttttgaatgtccctgaagaagatcaa
cagtcattcgagagaattttgtttctggtggagtatgcttattggtactatgaagataat
gctgtagagaatgatccaaagcttaagtccctgtctttgaaagagtttacttcgctctta
ttcaacagctgtgatgtgttgagaccttatgttactcacattgatgatatctttaaagac
ttcacttcttacaagtgtcgagttccagtcactggggcaattatcctggatgagacatat
gaaaggtgcctgttggtgaagggatggaaaggatcgagctggagctttccccgcggaaaa
aagagcaaggatgaagaagaccatgcttgtgccatacgtgaggtcttagaggaaactgga
tttgatgtctcaaagctactcaagagagaagaatatatagagtttgttttcaggcagcaa
agagtacgactttacattgttgctggggtgacagaagatacagtttttgcaccacttaca
aagaaggaaatcagtgaaatcacatggcatcggcttgatcatcttcagccagcaagtaat
gaggtgataactcatggagtttctggtctcaaattgtacatggtggcacctttcctttcg
tcattgaagtcgtggatattaaagcatccttcacctgtagcacggagacctaacaagccc
cttaaagcactctgcgtgtggaatgcaaggactagtgttggagggaacgggacagcaaca
gtggaaagccaaaatagaaagtctgaactcaggacaacaacaatggaaagcaacagtaga
aagcctgaactcaagagaacaacaatggaaagccacagtacaaagcctgaactcaggaaa
ggaacaatggaaagccacaatacaacagcaacagtagaaagccacaatacaaagcctgta
gtcgaccattctcaggacataaaacctggtggcagtttcataaacttcaagttcaaccag
tcagttatcttacaggcgttggaatctggtaattcagcttga
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