Arabidopsis thaliana (thale cress): AT5G13980
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Entry
AT5G13980 CDS
T00041
Name
(RefSeq) Glycosyl hydrolase family 38 protein
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
AT5G13980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT5G13980
Enzymes [BR:
ath01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
AT5G13980
Membrane trafficking [BR:
ath04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
AT5G13980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Motif
Other DBs
NCBI-GeneID:
831246
NCBI-ProteinID:
NP_196902
TAIR:
AT5G13980
UniProt:
Q8LPJ3
A0A5S9Y4L9
LinkDB
All DBs
Position
5:4508406..4514666
Genome browser
AA seq
1024 aa
AA seq
DB search
MDLAKFLCWIVLLLGISLVESRYMVYNTSHTIVPGKLNVHVVPHSHDDVGWLKTVDQYYV
GSNNSIQVACVQNVLDSIVPALLADKNRKFIYVEQAFFQRWWNEQSEEIKRIVKELIHSG
QLELINGGMCMHDEAAPHYIDMIDQTTLGHRFIIREFNVTPRIGWQIDPFGHSAVQAYLL
GAEVGFDSVFFGRIDYQDREKRYKEKTLEVIWRGSKSLGSSSQIFAGAFPTNYEPPPGGF
YYEITDDSPVVQDDPDLFDYNVQERVNAFVAAALDQANITRINHIMFTMGTDFRYQYAHT
WYRQMDKLIHYVNLDGRVNAFYSTPSIYTDAKHAANEAWPLKTEDYFPYADRINAYWTGY
FTSRPALKRYVRVMSAYYLAARQLEFFKGRSQKGPNTDSLADALAIAQHHDAVSGTSKQH
VANDYAKRLAIGYVEAESVVATSLAHLTKVDPTLNPTFQQCLLLNISYCPSSEVNLSDGK
SLIVLAYNPLGWKRVDIVRLPVVGGDVSVHDSEGHEVESQLVPFTDEYVALRKYHVEAYL
GQSPTQVPKYWLVFSVTVPPLGFTTYTISTAKKTDGYSSKSYVSNILKGEQSIINIGHGH
LKLSFSTDQGTAINYVNGRTSMTEPVKQTFSYYSAYNGSNDKEPLIPQNSGAYVFRPNGT
FPINPEGQVPLTVIHGPLVDEVHQQINPWISQITRVYKGKEHVEVEFIVGNIPIDDGIGK
EVVTQISSSLKSNKTFYTDSSGRDYIKRIRDYRSDWKLDVNQPIAGNYYPINHGIYLQDS
KKEFSVMVDRAFGGSSIVDGQVELMLHRRLLLDDSRGVAENLNETVCVQDKCTGLTIQGK
YYYRIDPYGEGAKWRRTFGQEIYSPLLLAFAQQDDGKPMSFGAASFSGIDPSYSLPDNVA
LLTLQELDDGNVLLRLAHLYEVEEDKELSGVASVELKKLFPGKKIGKLTEMSLSANQERS
TMEKKRLVWKVEGEGSYGEEKKAKRGREIDPRKLEMELYPMEIRTVLIHLELPSSHSRIN
RFDA
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgctaagtttctgtgttggattgttttgctactgggaatctcactcgtagaa
tcaaggtacatggtctacaatacttcacataccattgttcctggaaaacttaatgtccat
gtggttcctcattctcacgatgatgttggttggctcaagaccgttgaccagtactatgtt
ggctccaacaactctatccaggttgcttgtgttcaaaatgtactggattcaattgttcct
gcgctgttggctgataagaatcgcaaattcatttatgttgaacaggcgttttttcagcgg
tggtggaatgaacaaagtgaggagattaagcgtattgtgaaagaacttatacactcaggc
caactagagctcataaatggtggtatgtgtatgcatgatgaagcagcaccacactatata
gatatgattgatcagacaaccctcgggcatcgattcattatcagagagttcaatgtgact
ccaagaatcggttggcagattgatccctttggacattctgcagtgcaggcttacttgcta
ggcgcagaagttggcttcgactcagtcttttttggccggatagattaccaggacagggag
aagcgttataaagagaagactcttgaagttatctggcggggctctaagagtctcggttct
tcttcacagatttttgccggtgctttccctacgaactacgaacctccacctggtggcttc
tactatgaaatcaccgatgattcccccgttgtccaagatgatcctgacctgtttgattac
aatgttcaagagcgagtgaatgcctttgtagctgcagctttggatcaggccaacattact
cgaataaatcacatcatgtttaccatgggaacagatttcaggtaccaatatgcccacacc
tggtatcgacaaatggacaagcttattcattatgttaacctcgatgggcgtgtcaatgct
ttctactctaccccttccatatatacagatgcaaaacacgcggcaaatgaggcttggccc
ctgaaaacagaggactatttcccttatgcagaccgtataaatgcttattggactggatat
tttacaagtaggccagcacttaagcgttatgtcagagtgatgagtgcctactacttggcg
gcaaggcaacttgagtttttcaaagggagaagtcagaagggtccgaatacagattcgtta
gcagatgcactagcaattgctcaacatcacgacgctgtttctggtacgtcgaaacagcat
gtggctaatgattatgcaaaacgactagcaataggctatgtggaggctgagagtgtggtt
gctacttctcttgctcatctgactaaagtagatcccaccctgaatccaaccttccaacag
tgtttgttacttaacataagttactgtccctcaagcgaagtcaacttatccgatgggaaa
agtttgatcgtattggcttataacccactaggatggaagcgagtggacattgtccggctt
cctgttgtgggcggagacgtttcggtacatgactctgagggacacgaagttgagtctcaa
cttgttccatttactgatgaatatgtggccttaaggaaatatcatgtagaggcatactta
ggtcaaagccctacacaggtgccaaagtattggcttgtgttttcagtaactgtgcctcct
cttggcttcactacttacactatctccactgctaagaaaacagatggatattctagcaaa
tcatacgtctccaatatcctaaaaggcgaacagtcaataattaacattggtcatgggcat
ctgaagcttagtttttccactgatcaagggacagcaatcaattatgttaacggcagaacc
tcgatgacagaaccagtcaaacagacatttagctactactctgcatacaatggatcaaat
gacaaagaacctcttatacctcaaaactcgggtgcgtatgttttccgtccaaatggtaca
ttccccatcaatccggaaggacaggttcctttgactgttatacatgggccgctagtggac
gaagtacaccaacagattaatccatggatatctcagatcactagagtttataagggcaag
gagcatgtggaagttgaatttattgttggtaatataccaattgatgatggaattggcaaa
gaagtagtaacccagatctcaagttccctgaaaagcaataaaactttctacacggattca
agtggacgtgattatatcaaaaggatccgtgattacaggtcagactggaaactagatgtc
aaccaacctattgcaggaaattattacccgataaatcatggaatttacttgcaagacagt
aagaaggaattctcagtgatggtggacagagccttcggggggtcgagcatagtggacgga
caagttgagctaatgcttcataggagactgctcctcgatgactccaggggtgtagcagaa
aatctaaatgagacagtgtgcgttcaagacaagtgtactgggctaactatccaaggaaaa
tattactatagaattgatccatatggagaaggtgcaaaatggagacgtacattcggacaa
gaaatctactcgccactcctcttggcttttgctcaacaggatgatggaaagccgatgagt
tttggtgcagcatcattctccgggattgatccatcgtacagtctgcctgacaatgtggca
cttctgactctgcaggaactggatgatggaaacgtgctcctgcgtctagctcatctttat
gaggtggaagaggacaaggaactatcaggagtagcaagcgtggaactcaaaaagcttttt
cctggaaagaagatcgggaaattgacggagatgagcctatcagcaaatcaagaaagaagc
acgatggagaagaagaggttggtgtggaaagtagaaggtgaaggatcttatggagaggag
aagaaggcaaagagagggagagaaattgatccaagaaagctggagatggagctttacccg
atggagattaggaccgtgttgatccacttagagcttccatcttctcattctcgcataaac
agatttgatgcctaa
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