Arabidopsis thaliana (thale cress): AT5G14250
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Entry
AT5G14250 CDS
T00041
Symbol
COP13
Name
(RefSeq) Proteasome component (PCI) domain protein
KO
K12177
COP9 signalosome complex subunit 3
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT5G14250 (COP13)
Ubiquitin system [BR:
ath04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
COP9 signalosome (CSN) complex
AT5G14250 (COP13)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PCI
L27
dsDNA_bind
Motif
Other DBs
NCBI-GeneID:
831275
NCBI-ProteinID:
NP_568296
TAIR:
AT5G14250
UniProt:
Q8W575
A0A178UB34
LinkDB
All DBs
Position
5:4597868..4600835
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AA seq
429 aa
AA seq
DB search
MIGAVNSVEAVITSIQGLSGSPEDLSALHDLLRGAQDSLRAEPGVNFSTLDQLDASKHSL
GYLYFLEVLTCGPVSKEKAAYEIPIIARFINSCDAGQIRLASYKFVSLCKILKDHVIALG
DPLRGVGPLLNAVQKLQVSSKRLTALHPDVLQLCLQAKSYKSGFSILSDDIVEIDQPRDF
FLYSYYGGMICIGLKRFQKALELLYNVVTAPMHQVNAIALEAYKKYILVSLIHNGQFTNT
LPKCASTAAQRSFKNYTGPYIELGNCYNDGKIGELEALVVARNAEFEEDKNLGLVKQAVS
SLYKRNILRLTQKYLTLSLQDIANMVQLGNAKEAEMHVLQMIQDGQIHALINQKDGMVRF
LEDPEQYKSSEMIEIMDSVIQRTIGLSKNLLAMDESLSCDPLYLGKVGRERQRYDFGDDF
DTVPQKFSM
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgatcggagctgtgaactcggtggaggctgtgataacgtcaatccaaggtttatcgggg
agtccagaggatttatctgcacttcacgatcttttgagaggagctcaagactcgctccga
gccgaaccaggtgttaatttctctactcttgaccagctcgacgcctcgaagcactctctc
ggttacctgtatttccttgaggttcttacctgtggtccagtgtcgaaggagaaagctgct
tatgagataccgataattgcacggttcatcaattcttgtgatgctgggcagattcgtttg
gcgagctataaatttgtatctctttgtaagatattgaaagaccatgttatagcactggga
gatccgttgcgaggagtagggccactgttaaacgctgttcagaagcttcaggtctcctcc
aagcgtttgactgcattgcatccagatgttcttcaactctgtttgcaggcgaaatcgtac
aaatctggtttctccattcttagtgatgatatcgtggagattgaccagccaagagacttt
tttctctatagctattatgggggaatgatttgtattggactgaagagatttcagaaagca
ttagagcttctttacaatgttgtgactgctcctatgcatcaagtcaatgccatagctctt
gaggcgtacaaaaagtacatattggtgtctctcattcacaatgggcagtttactaacact
ctccccaagtgtgcttctacagcagcacagaggagcttcaagaactataccggaccttac
attgaactgggtaattgttacaacgacgggaagattggtgaactagaggcattggttgtg
gccaggaatgcagaatttgaagaggataagaaccttggattagttaagcaagcagtgtca
tccctttacaagcgtaacattctgagattgacacagaagtacttgaccctgtcgcttcaa
gatatagccaacatggtccaacttggtaatgctaaggaggcggaaatgcatgtgcttcag
atgatccaggatggtcagatacatgcccttatcaaccagaaagacgggatggtcagattc
ttggaggaccctgagcagtacaaatctagtgagatgattgagatcatggattctgttata
caaaggactattggtctgtcgaagaatctcttagccatggatgagagcttatcatgtgac
cctttatacttgggaaaggtaggaagggaaagacaaaggtacgactttggagacgatttc
gatactgttcctcagaagttctccatgtaa
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