Arabidopsis thaliana (thale cress): AT5G14460
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Entry
AT5G14460 CDS
T00041
Name
(RefSeq) Pseudouridine synthase family protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ath03016
]
AT5G14460
Enzymes [BR:
ath01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AT5G14460
Transfer RNA biogenesis [BR:
ath03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AT5G14460
Prokaryotic type
AT5G14460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
831297
NCBI-ProteinID:
NP_196950
TAIR:
AT5G14460
UniProt:
A0A178UDE2
Q0WVR7
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All DBs
Position
5:complement(4660059..4662668)
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AA seq
540 aa
AA seq
DB search
MAKSLHFTRLMSSSARMSMTSPLFFSSVKPWRNIHKPYLASLFLSTTSTRYPLQYDMIIN
RPTQSSLSQNRRRPPKAIESGAPDSAEPEFDSWVDNKLAMEREQGRPGSGDPEMDKAKRK
YYSKRRKRLYGSDSEDENSSRKSDEGFVELKPEVVEFDRLHQREEELYFYDTFAYPWEKD
KHYKMVYQLEKKYYPDQCLDKAFLQPGEVLKKSDDSGKVRGKKKVVAALGGKRSEVKRIG
MENCDEDDDKLVFFDEVKEKEEKKKSEDDVVVVTEKKVEQFFKGLTKSPNEKGMASGGGD
GEPFLVTRNGELPPRWDGPNGTVLLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMA
TGLLIVCVGKATKVVDRYQGMIKGYSGVFRLGEATSTLDADSPVIQRESWEHIKDDDIKK
ALTSFLGEIWQVPPMFSAIKVGGEKMYEKARRGETVELSPRRISIFQFDIERSLDDRQNL
IFRVICSKGTYIRSLCADLAKALGSCAHLTALRRDSIGEYSANDAWEFNELEAAITKNYF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatctctacacttcacaagactaatgtcttcttcagcaagaatgtcaatgact
tctcctctcttcttctcctcagtcaaaccatggagaaacatccataaaccctacttggct
tctctcttcctctccacaacatctactcgatacccacttcaatacgacatgatcatcaat
cgtcccacacaatcatctctctctcaaaaccgtcgtcgtccccctaaagccatcgaatcc
ggtgcacctgactcagcagagccggaattcgattcatgggtcgacaataaactggctatg
gagcgtgaacagggtcgacccggttctggagatccggaaatggataaagccaagaggaaa
tactacagtaagagaaggaagagactatacgggtctgattctgaagatgagaacagtagc
agaaaatcagatgaaggattcgttgaattgaaacctgaagttgttgaatttgataggtta
catcagagagaagaggaattgtatttttatgatacttttgcttatccatgggagaaagat
aagcattataagatggtgtatcagttagagaagaagtattatcctgaccagtgtttagat
aaggcgtttctgcaacctggagaagttttgaagaagagtgatgattctgggaaagttaga
gggaagaagaaagtagtagcagcacttggtgggaagagaagtgaggttaaacgaattggt
atggagaattgtgatgaggatgatgataagttggtgttttttgatgaagtgaaggagaag
gaggagaagaagaagtcagaggatgatgttgttgttgttactgagaagaaagtggaacag
ttctttaagggtttaacgaaatctcccaatgagaaaggtatggctagtggtggtggtgat
ggagaaccttttcttgttacgagaaacggtgaacttcctcctagatgggatggtcctaac
ggtacagtgcttttggtgaacaaacctaaaggatggacttctttcactgtctgtggtaag
ctacgacgattagtcaaagtgaaaaaggtgggtcatgctggaacacttgatcccatggct
actggtctattaatcgtctgcgtcggtaaagccactaaggttgttgacagataccaaggt
atgatcaaaggttatagcggagtttttcgtcttggtgaagccacttcaactctagacgct
gactctcctgtgattcagcgagagtcttgggagcatataaaagatgatgacattaagaaa
gctttgacatcatttcttggagaaatatggcaagttccaccgatgttctctgcgataaaa
gttggaggtgagaagatgtacgagaaggcaagaagaggagaaaccgtagagctttctcca
agaagaatttcaattttccagtttgacattgaacgcagtttagatgacagacaaaatctg
atattccgggttatatgctctaagggtacatacataagatctctctgtgcagatcttgcg
aaagctcttggaagttgtgctcacctcactgctctccggcgagattcaattggtgaatat
tctgctaatgatgcttgggaattcaatgagttagaagcagcaatcactaaaaactacttc
tag
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