Arabidopsis thaliana (thale cress): AT5G14580
Help
Entry
AT5G14580 CDS
T00041
Name
(RefSeq) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AT5G14580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT5G14580
03016 Transfer RNA biogenesis [BR:
ath03016
]
AT5G14580
Enzymes [BR:
ath01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AT5G14580
Messenger RNA biogenesis [BR:
ath03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AT5G14580
Transfer RNA biogenesis [BR:
ath03016
]
Prokaryotic type
tRNA degradation factors
AT5G14580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
Motif
Other DBs
NCBI-GeneID:
831309
NCBI-ProteinID:
NP_196962
TAIR:
AT5G14580
UniProt:
Q9S7G6
A0A5S9Y435
LinkDB
All DBs
Position
5:complement(4697207..4703091)
Genome browser
AA seq
991 aa
AA seq
DB search
MSSIVNRASSASLPNFLAWRALGFRTICSGRLGFAPSVPDSPVSAGTKILESFKEEFEVG
SRVVSFETGKIARFANGSVVLGMDETKVLSTVTCAKTDSPRDFLPLTVDYQEKQYAQGLI
PNTYMRREGAPKERELLCGRLIDRPIRPLFPTGFYHEVQIMASVLSSDGKQDPDILAANA
SSAALMLSDVPWGGPIGVIRIGRICGQFVVNPTMDELSSSDLNLIYACTRDKTMMIDVQS
REISEKDLAAALRLAHPEAVKYLDPQIRLAEKAGKQKKEYKLSMLSDKTLEKVADLAATR
IESVFTDPSYGKFERGEALDNIGKDVRKVFEEEGDQESLSILPKAVDTVRKKVVRSRMIS
DGFRVDGRHVDEVRPIYCESHYLPALHGSALFSRGDTQVLCTVTLGAPAEAQSLDSLVGP
PKKRFMLHYSFPPYCTNEVGKRGGLNRREVGHGTLAEKALLAVLPPEEAFPYTIRINSEV
MSSDGSTSMASVCGGSMALMDAGIPLRAHVAGVSVGLITDVDPSSGEIKDYRIVTDILGL
EDHLGDMDFKIAGTRDGVTAIQLDIKPAGIPLDIVCESLENAREARLQILDHMERNINSP
RGQDGAYSPRLATLKYSNDSLRTLIGPMGVLKRKIEVETGARLSIDNGTLTIVAKNQDVM
EKAQEQVDFIIGRELVVGGVYKGTVSSIKEYGAFVEFPGGQQGLLHMSELSHEPVSKVSD
VLDIGQCITTMCIETDVRGNIKLSRKALLPKPKRKPASDAGKDPVMKESSTVYIENSSVG
EIVASMPSIVTPLQKSRLSVPAVVIRTAVECNEAEKSSPVNDNDKPRRAATSKPDRKPKS
TASKLIATQKEEEALESIAPEETSAECGEILKQDGKLKSVSPKNNSTASNLVSFSKAKKS
TMKENLSENKAEESASVSTRKLKIGTEMTATVDHVRALGLVLDLGGEIRGMYIFQGDKDK
FKKGDTLRVKCTSFNTKGVPVMALVDEEGEE
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgattgtgaatcgagctagttcagcttctcttcctaatttcctcgcatggcgt
gctctggggtttcgcaccatctgctccggccgccttggtttcgctccgtctgttccagac
tcgccggtctccgcaggaaccaaaattttggaatcatttaaggaggaattcgaagtcgga
tcccgcgtggtctcgtttgagactggaaaaatcgctcgctttgctaatggttcagttgtt
ctcggcatggacgagaccaaagttctctctactgttacttgtgctaagaccgactcgcct
cgggacttcttacctctcactgttgactatcaagagaagcaatacgctcagggattgatt
ccaaatacgtatatgcgaagagagggtgcaccaaaggagcgggagctgttatgtggccgg
ctcattgatagaccaatcagaccattgtttcctacagggttttaccatgaagttcagata
atggcaagtgttctatcgtcagatgggaagcaggatccagatatactggcagctaatgca
tcatcagctgcgctcatgctatcagatgttccatggggagggcccattggagtcatccgg
ataggaaggatatgtgggcaatttgttgtcaatccaactatggatgagcttagctcaagt
gatctcaatttgatatacgcttgcacaagggataagactatgatgattgatgttcaatcc
cgagaaatctcagagaaagatttagcagctgctctgaggctagctcatccagaggctgtc
aagtaccttgatccccaaattagattggcagaaaaagctgggaaacaaaagaaggagtac
aaattgtccatgctttctgataaaactttagaaaaagtggctgacttggctgcaacgcgt
attgaatccgtctttaccgacccttcatatggaaagtttgaacgtggagaggctctagat
aacattggaaaagatgtaagaaaggtatttgaagaagagggtgatcaagaaagcttgagc
atccttccaaaggctgttgatacagtgagaaagaaggtagtccgttcaaggatgatatca
gatggatttcgagtcgacgggagacatgttgatgaagttaggcccatctactgcgaatcg
cattacttacctgcgctgcatggatcagcacttttctcacgtggagatacgcaggtgctc
tgtactgtaacacttggagccccagcagaagcacaaagcttggattctcttgttggcccc
ccgaagaagagattcatgcttcactacagctttcctccatattgtacaaatgaagtcgga
aaacgaggaggccttaacaggcgtgaagttggtcatggaacacttgctgagaaagcattg
cttgctgtattgccccctgaagaggcttttccttataccattcgtataaattcagaagta
atgtcctcagatggatccacgtcgatggcaagcgtttgtggaggtagtatggcattgatg
gatgctggaattcctctgcgagctcatgttgcgggtgtatctgttggtcttatcaccgat
gtagatccatcaagtggtgaaataaaggactaccgtattgtaaccgatattctcggtttg
gaagatcatcttggagatatggatttcaagattgctggcacacgagatggtgtgacagca
attcagctggatataaagccagctggaataccgttggatatagtttgtgaatccttagaa
aatgcacgtgaagcccgtcttcagattcttgaccacatggagagaaacataaattcccca
cgaggccaggatggggcttactctcctcggctagcaacgctcaagtactccaatgactca
cttcgtaccttgatcggacctatgggtgtactcaaaagaaagattgaagtggaaacaggt
gcaagattgtctattgataatggaacattaactattgttgccaagaatcaggatgtgatg
gaaaaggcccaagaacaagttgacttcatcattggtcgtgaactagttgttggtggtgtg
tacaaaggcacagtgtcatctataaaagagtatggtgcatttgttgagttccctggtggt
cagcaaggtctactacatatgtctgagctatcccatgaaccagtctccaaggtttcagat
gtattagatattggccagtgcatcactacgatgtgcattgaaaccgatgtccgtggtaac
attaaattatcccgcaaagcactgttgcccaaacccaaacgcaaacccgcatctgatgct
ggaaaagatccggtgatgaaagagtcgtcaacagtctacatagaaaattctagtgttgga
gagattgttgcaagcatgcccagtatcgtaacgccacttcagaaatctagattatcagtt
cctgcagttgtcatccgtactgctgtggagtgtaatgaggcagagaaatcttcccctgtg
aacgacaacgacaaacccagacgcgctgctacatcaaagccagaccggaaacccaaatcc
acagcctctaaactgattgcgacacagaaggaagaggaggcactcgaatccattgctcca
gaagaaacttcagctgaatgtggtgagatactgaagcaggacgggaagctaaaatccgtt
tctcccaaaaacaatagcactgcttctaacctagtatcattttcaaaagctaagaaatca
actatgaaggagaatctatcagagaacaaggctgaagagagtgcatcggttagtacccga
aaactgaaaataggaacggagatgacagccacggtcgaccatgttcgagcccttggattg
gttcttgatttaggtggtgaaatccgcggtatgtacatattccagggagataaagataag
ttcaaaaaaggagacacattgcgagtgaaatgtacaagttttaacaccaaaggagtccct
gtgatggctttggttgacgaagagggagaagaatag
DBGET
integrated database retrieval system
