Arabidopsis thaliana (thale cress): AT5G14650
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Entry
AT5G14650 CDS
T00041
Name
(RefSeq) Pectin lyase-like superfamily protein
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00040
Pentose and glucuronate interconversions
ath01100
Metabolic pathways
Module
ath_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AT5G14650
Enzymes [BR:
ath01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
AT5G14650
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
EAD10
Motif
Other DBs
NCBI-GeneID:
831317
NCBI-ProteinID:
NP_001331452
TAIR:
AT5G14650
UniProt:
A0A1P8BDY0
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All DBs
Position
5:4724407..4726675
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AA seq
314 aa
AA seq
DB search
MCRLTLKCLSLNFLLLISLFSSRFGTCDARYSVYWKGNRRSIAEGGSSGTINVLDHGAKG
DGTSDDTKAFEDAWQVACKVAASTLLVPSGSTFLVGPVSFLGKECKEKIVFQLEGKIIAP
TSASAWGSGLLQWIEFKALQGITIKGKGIIDGRGSVWWNDMMGTKMPRTKPTALRFYGSN
GVTVSGITIQNSPQTHLKFDNCISIQVSDFTTSSPGDSPNTDGIHLQNSQDAVIYRSTLA
CGDDCISIQTGCSNINIHDVDCGPGHGISIGGLGKDNTKACVSNITVRDVTMHETTNGVR
IKSWQVNSVICITE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagactaacattgaaatgtctttccctgaactttctcctcttaatctccttattc
tcttcgagattcgggacttgtgacgctaggtacagtgtatactggaaaggaaaccgaagg
tctatcgccgaagggggaagttccggaacaatcaatgtgcttgaccatggcgcaaaaggt
gacgggacaagtgatgacacaaaggcttttgaagatgcttggcaggtagcttgtaaggtg
gcagcgtcaacattattagttccatctggttctacgttccttgttggacctgtttccttc
ctgggaaaagaatgtaaagagaaaatcgtctttcagttagaaggaaagatcatagctcca
acgagtgctagtgcatggggatcaggtctcttgcaatggatagaattcaaagcacttcaa
ggaatcactataaaaggaaaagggatcatcgatggacgaggatcagtatggtggaacgac
atgatgggtacaaaaatgccaaggaccaaaccaacagctttgaggttctacgggagtaac
ggtgttacggtcagtggaataaccatacagaacagccctcaaacccacctcaagtttgat
aactgcataagcatccaagtttctgatttcacaacttcatcccctggagattccccaaac
acagatggaatccacctgcaaaactctcaagatgccgttatatatcgcagcacgctggct
tgtggagatgactgtatatcaattcaaacgggatgctcgaatatcaacatacacgatgta
gactgtggccctggccatggaattagcattggaggactgggaaaggacaatacaaaggcg
tgtgtttcaaacatcactgtccgtgatgtcacgatgcatgaaactacgaatggtgttcga
ataaagtcctggcaggtaaattctgttatttgcataacagaatag
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