Arabidopsis thaliana (thale cress): AT5G15280
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Entry
AT5G15280 CDS
T00041
Name
(RefSeq) Pentatricopeptide repeat (PPR) superfamily protein
Organism
ath
Arabidopsis thaliana (thale cress)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR
PPR_1
PPR_3
PPR_long
HEAT_ECM29
Motif
Other DBs
NCBI-GeneID:
831380
NCBI-ProteinID:
NP_197032
TAIR:
AT5G15280
UniProt:
Q9LXF4
LinkDB
All DBs
Position
5:4962149..4966170
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AA seq
1227 aa
AA seq
DB search
MLNLLSISSSSRLRFLNKVSSLTYHYSFAFFSTSSPASSSSSSLGNDSAIPRNYESSSFN
LLSRSKEKRDLTGSSLKDLLFDLSDVVPNITRRFRRFPGLKPEDVLELSLGFESELQRGG
IGNIKVQALWEIFRWASVQYQGFKHLPQACEIMASMLIREGMVKEVELLLMEMERHGDTM
VNEGIFCDLIGKYVDDFDSRKAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRI
CLDWVETRAELNHMNIDSIGKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIG
YNEKQDFEDLLSFIGEVKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVT
FGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMK
ENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDP
LAVRLKRDNDSTFSKAEFFDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPEFNSLIVRASE
DGDLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGE
TLNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAA
QNDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFS
CIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLML
IPRLCRANKAGTAFNLAEQIDSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKI
YNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLL
LGESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADY
SSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTK
IVETLISKGEIPKAEDFLTRVTRNGMMAPNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSI
PGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERL
IKSMVGLGESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQKCGYEVDFETHWSLISNMSS
SKEKKTTTAGEGFLSRLLSGNGFTWKR
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgcttaatcttctctccatcagtagctcttctcggcttcgttttcttaacaaggtttct
tcactcacatatcattactctttcgcgtttttctctactagctcacctgcttcgtcctct
tcttcttccttgggaaatgattcagcgatcccaagaaattatgagtcttcctcgtttaat
ttactttcgaggtcgaaggagaagcgtgaccttactggttcctctctaaaagacttgctt
tttgatttgtcagatgtagttcccaatattacccgtaggtttagaagatttccgggcttg
aaacccgaagatgtgcttgaattatcattgggttttgaatctgagcttcagagaggtgga
attggaaatataaaggttcaagctttatgggagattttcagatgggctagtgtgcaatac
caagggtttaagcatttacctcaggcttgtgaaattatggcgtcgatgcttatcagggaa
ggaatggttaaggaagttgaattgttgcttatggagatggagagacatggagacacaatg
gttaacgaggggattttctgtgatttgattggtaaatatgttgatgatttcgattccagg
aaagcagttatgctgtttgattggatgaggcgtaagggtttagtacctctaacttcgtgt
tatcagattctaattgatcaattggttagagttcatagaacagaatcagcttatagaatt
tgtttggattgggtggagacaagggctgaattaaatcacatgaacatagatagcatcggg
aaagttatagagttgctttgtttggaccagaaggttcaggaggctagagttctggcaaga
aagcttgtggctttaggttgtatcctgaatagctcaatatatagtaagattactatagga
tacaacgagaagcaagactttgaggatttgttgagtttcattggtgaagttaaatatgaa
cctgatgtgtttgttggcaataggattctgcattctctctgcaggaggtttggctcagag
agagcttatgtatatatggaggaactcgaacacttgggttttaaacaagatgaagttacc
tttggtatcttgattggttggtgttgctatgaaggagatattaaaagagcggttctttat
ttatccgagattatgtcaaagggttataaacccgatgtgtatagttataatgctatccta
agtgggctttttagaaaaggattgtggcaacatacccattgtattctggatgagatgaag
gaaaatggaatgatgctcagcttgtctacttttaagataatggtaactggatactgcaaa
gctagacagtttgaagaagcgaagaggattgtcaacaagatgtttggttatgggttaatc
gaagcatctaaagttgaggatccactttcagaagcttttagtttggtaggatttgatccg
ttagctgttagattgaaaagggacaatgattccacattttccaaagctgagttctttgat
gatcttgggaatgggctatacttgcacactgatttggatgcttacgagcagagggtgaat
atggtacttgacaggtccgtgctaccggagtttaattcgcttatcgttagagcatctgag
gacggtgatttacaaacagcattgcggcttcttgatgaaatggctcgatggggtcagaaa
ctatcgcgtcggagttttgctgttttaatgaggagtctctgtgcatcgcgtgcccatctc
agagtaagtattagtttattggaaaaatggccaaagctggcttatcagttagatggagaa
acccttaattttcttgtccaagaatattgcaagaagggatttagtcgccatagcaaactc
attttccataaaatggttcaaatgcatcatcctatcgataacgtaacttacacatctttg
atacgttgtttctgtaagaaagaaacactcaatgatcttctgaatgtctggggtgctgcc
cagaatgataactggttacctgatttgaacgattgcggagatctgtggaactgtcttgtc
cggaaaggattggtggaggaagtggttcaactctttgagcgtgtattcatatcttatcct
ctatctcagtcagaagcgtgtaggatttttgtcgagaagctgacagttcttgggttttct
tgtatcgctcattctgttgttaaaaggcttgaaggagagggttgcattgtggaacaagag
gtttacaatcatcttatcaaaggactctgcacggaaaagaaggattcagctgcatttgct
atactcgatgaaatgctagacaagaaacacattccaagtttgggaagttgtttgatgttg
attcctcggctttgtagagctaacaaagcaggaacagcatttaatttagcagagcaaata
gattcatcctatgtacactatgctttgataaaaggattaagcttagctgggaaaatgctc
gatgcagaaaatcagttacgtataatgttatcaaacgggctttcatcgtataacaaaatc
tacaatgtgatgtttcaaggttattgtaaaggtaacaactggatgaaagttgaggaagta
ctaggactcatggtgaggaagaacataatctgttcagttaagagttacagagaatatgtt
cgaaaaatgtgtttagagcctcagtctctctctgcaattagtctgaaggagtttctgttg
ctaggagaaagcaatcctggtggcgtaatcatctataatatgctgattttctatatgttc
agggcaaagaatcacttggaggttaacaaagtcttgctcgaaatgcagggaagaggagtg
ttgcctgatgaaaccacatttaactttctcgttcacggatactcttcgtctgcagattat
tcgagttctctgcgatatctctcagctatgatctccaaggggatgaaaccgaataatcga
agcttaagagcggttacaagctctctgtgtgataatggagatgtgaagaaagctcttgac
ttgtggcaggtaatggaatcaaaaggctggaatttaggttcttcagttgtccaaaccaaa
atcgtcgaaaccctgatttcgaaaggcgaaattccaaaagctgaagactttctgacccgt
gtgacacgcaatggcatgatggctcccaactatgataatataatcaagaaactatctgat
cgcgggaatcttgacattgcggttcatctcttgaacacaatgttaaagaaccaaagcatt
ccgggttcttcaagctatgattcagtcatcaatggcttgctgagatacaatcaactggat
aaagctatggactttcatacagaaatggtggagttaggtttaagtccgagcataagtaca
tggagtggtcttgttcataagttctgtgaggcatgtcaagttttggaatcagaaagactt
atcaaatcaatggttgggttaggcgaatcaccgagtcaagagatgtttaagactgtgatt
gatcggtttcgagtagagaagaatacagtgaaagcttcagagatgatggaaatgatgcaa
aagtgtgggtatgaagttgattttgagactcattggtctttgattagtaacatgagctct
tctaaagagaagaagacaacaacagctggtgaaggattcttatctaggcttctctctggg
aatgggtttacttggaagcgatga
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integrated database retrieval system
