Arabidopsis thaliana (thale cress): AT5G16270
Help
Entry
AT5G16270 CDS
T00041
Symbol
SYN4
Name
(RefSeq) sister chromatid cohesion 1 protein 4
KO
K06670
cohesin complex subunit SCC1
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ath03036
]
AT5G16270 (SYN4)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
AT5G16270 (SYN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
Cortex-I_coil
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
831487
NCBI-ProteinID:
NP_197131
TAIR:
AT5G16270
UniProt:
Q8W1Y0
LinkDB
All DBs
Position
5:5316197..5322700
Genome browser
AA seq
1031 aa
AA seq
DB search
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEAPIALRLSSHLL
LGVVRIYSRKVNYLFDDCSEALLKVKQAFRSAAVDLPPEESTAPYHSITLPETFDLDDFE
LPDNEIFQGNYVDHHVSTKEQITLQDTMDGVVYSTSQFGLDERFGDGDTSQAALDLDEAV
FQDKDVIGSDDEGVPGIDHNAYLDAAAPGIKDSMEGVSEAMPMDFNEEQVEDLAMNNEFI
EDAQAPQTPGLVEVPNSSSVREQMACDDHMDVEDLNAEEGIKSSGELNANEMPKRGEDLS
SEYNAPESAVTPVEVDKSQIDENVNTQNEPEEERAEHVHVTSPCCSHITTEMEDPGQVMN
EAGANVVPDKPDAVPPLETPGEENRDHFAIATEVNQETDSSLQGDEQAYSRPDGQLNNAH
ETDEQLGNLTGFTDSDFPPPEKVLAVPNRQGDGNDFMVESTPDKEDPGTCNDDAGNNNIT
GKKRTFTESTLTAESLNSVESVGLIQSKRTADSVPDDDDLLSSILVGKSSFLKMRPTPVL
EPATTKRLRSAPRSTATKRKVLMDDPMVLHGDIIRQQLTNTEDIRRVRKKAPCTVPEIVM
LQRQALEDGLFKEPIFTGMSVELVSLHTEPYDLRGIMIIENDDRHASVGAVEDNECSVTA
VEENKTEESSDPQAHPNDCEEQPGTAHTHPQEEQTINQQEELKDDNELAEKSDLEVLKEG
NGAADEVNLVVIDDVSQIPSEEKLDRVEDLQVEESHENHDGEGGQDVCADPNEKSCTDVI
EIAEGDTDINPIFNEMDLKVEDELPHEDEKTDASAEVSELGRDDQTPCDNTVGSTETGCL
EAGDLSNMALENCNEPLVEANSDGLNPETESYNKYEPHNEMSNEEASMQNALDGEHTSRD
GLMGDNDEMDTMENAHDTGFLNVDDDEVDEDHEEDDIQYDDETRLLENSGWSSRTRAVAK
YLQTLFDKETENGKNVLVADKLLAGKTRKEASRMFFETLVLKTRDYIQVEQGKPYESIII
KPRPKLTKSIF
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgttttattcgcagtttatattagctaagaaagggccacttgggacaatatggattgct
gcccatttggagaggaagcttcgaaagaatcaggtcgctgatactgatattggagtctcc
gttgattctattctctttccggaagctccgattgcattgcgattgtctagtcatcttctg
cttggtgttgtgcgtatatattcgagaaaggtgaattacctctttgatgattgcagtgag
gcattgcttaaggtaaagcaagcttttcgctctgctgctgttgacctaccccctgaagaa
tctacagcgccgtatcactctattacgttgccagagacatttgatcttgatgactttgag
cttccagacaatgagatctttcagggtaattacgttgatcatcatgttagtacaaaagag
cagatcacccttcaggataccatggatggcgttgtatactcaacgtcacaatttggatta
gatgagcgatttggtgatggcgacacttctcaagctgctttggatcttgatgaggcagta
ttccaggacaaggatgttattggatccgacgatgagggagttccaggtattgatcacaac
gcgtatctggatgcggcagcacccgggataaaggattcgatggaaggagtctctgaagcc
atgcccatggattttaatgaagagcaggttgaagatcttgctatgaataatgagttcatc
gaagatgctcaagctcctcaaactcctggattagttgaggtgccaaactcgtctagtgtg
agagagcagatggcatgcgatgatcacatggacgtagaggatctgaatgcagaagaaggt
ataaagtcctctggggagctgaatgctaatgagatgcctaaacgtggggaagacctgtct
tctgaatataatgccccagaatcagcagttactcctgtggaggtagataagtcacagata
gatgaaaatgtcaacacacaaaatgagccggaggaggagagggcagagcatgtacatgtt
acatctccatgttgttctcacatcaccaccgagatggaggatcctggtcaagtaatgaat
gaggcaggagctaatgttgtacctgataaacccgatgctgttcctccacttgaaacccct
ggagaagagaaccgagatcattttgccattgccactgaggtcaatcaggaaacagattct
agtttacaaggagatgagcaagcgtacagtagaccagatgggcagctgaataatgcacac
gaaactgatgaacagttgggaaatttgactggatttaccgattctgatttccctccacct
gagaaggtattagctgtacctaacagacagggggatggaaatgatttcatggttgaatct
acaccagataaagaagaccctggcacatgtaatgatgatgcggggaataataacattact
gggaaaaaacgcacttttactgagagcacactaactgcagaaagtttgaactctgtggag
tcagttggactgattcagtcaaagagaactgcagattctgtccctgatgacgatgatttg
ttgtcttctatcttagttggaaagtcatcctttctgaagatgaggcctacccctgtgctt
gaaccagcaactacaaaacggttacgatctgctccccgctctactgccacaaagaggaag
gttctaatggatgaccctatggtcttgcatggcgacattatacgtcaacaactgacaaac
actgaagatatacggcgcgtgcgaaagaaggcaccttgcaccgttcctgaaatcgtaatg
cttcaaaggcaggctttggaggatggactctttaaggagccaatatttactggtatgtca
gtggaattagtatctctgcacactgagccgtatgatctaagaggaatcatgataattgag
aatgatgaccgtcatgcttctgttggagcggtggaagataatgaatgttctgttacggcc
gtggaagaaaataaaacggaagaaagctctgatccgcaagctcacccaaatgattgtgag
gagcaacctggtacggctcatactcacccgcaggaggaacaaaccataaaccaacaggaa
gagctgaaagatgataatgagcttgctgaaaaatctgacttggaggttttgaaggaaggc
aatggagctgctgatgaagtaaatcttgtagtgattgacgatgtcagtcaaataccgtct
gaggaaaaactcgaccgtgtagaggatttacaggttgaagaatcccatgaaaaccatgat
ggagaaggcgggcaggatgtttgtgcggatcctaatgaaaaaagttgcactgacgttatt
gaaattgctgaaggcgatacagatatcaaccccattttcaatgagatggacttgaaagtt
gaagatgaacttccacatgaagatgagaaaacggatgcatcagctgaagttagcgagctt
gggagagacgatcagactccatgcgataacacagttgggtctactgaaactggatgccta
gaagctggtgatttgagtaacatggctttggaaaattgcaatgaacctctggtggaagcg
aatagtgatgggttgaatccagagacagagtcttataacaaatacgaaccgcataatgag
atgtctaatgaggaggcgtctatgcaaaatgcattagatggagagcatacttctcgtgat
ggtcttatgggagacaatgatgaaatggataccatggaaaatgcacatgacacaggattt
ttgaacgtcgatgatgatgaagtagatgaagatcatgaggaggatgacatacaatatgat
gatgaaactcgtcttctagaaaacagtggatggtcttctcgtactagggctgtggcaaag
tatctccagacgttatttgataaagaaaccgagaatgggaagaatgttcttgtggcagac
aaacttttagctgggaaaacccgtaaagaagcatcgagaatgtttttcgaaaccctggtt
cttaaaacaagagattacatccaagtcgaacaagggaagccctatgaaagcatcatcata
aaaccgcgaccaaagctcaccaaatccatcttctag
DBGET
integrated database retrieval system
