Arabidopsis thaliana (thale cress): AT5G16750
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Entry
AT5G16750 CDS
T00041
Symbol
TOZ
Name
(RefSeq) Transducin family protein / WD-40 repeat family protein
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AT5G16750 (TOZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ath03009
]
AT5G16750 (TOZ)
Ribosome biogenesis [BR:
ath03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
AT5G16750 (TOZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_EML_2
Utp13
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_Aladin
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_Nup120_160
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_HPS5
KNTC1_N
Beta-prop_WDR75_2nd
Beta-prop_NWD2_C
PROPPIN
Ge1_WD40
Beta-prop_VPS8
Beta-prop_Vps41
WD40_like
Nbas_N
Cytochrom_D1
Beta-prop_NOL10_N
Beta-prop_RSE1_2nd
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
831538
NCBI-ProteinID:
NP_568338
TAIR:
AT5G16750
UniProt:
Q9LFE2
LinkDB
All DBs
Position
5:complement(5504242..5509361)
Genome browser
AA seq
876 aa
AA seq
DB search
MAPHSLKKNYRCSRSLKQFYGGGPFIVSSDGSFIACACGDVINIVDSTDSSVKSTIEGES
DTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATA
GADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNT
EKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYSCKATVATYEVLEAVT
TVSSGTPFASFVASLDQKKSKKKESDSQATYFITVGERGVVRIWKSEGSICLYEQKSSDI
TVSSDDEESKRGFTAAAMLPSDHGLLCVTADQQFFFYSVVENVEETELVLSKRLVGYNEE
IADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIV
TGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGIS
EDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGH
KRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVS
CGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLWHDSTASDK
EDDFRKEEEAILRGQELENAVLDAEYTKAIRLAFELCRPHKVFELFSGLCRKRDSDEQIV
KALQGLEKEEFRLLFEYVREWNTKPKLCHIAQFVLYKTFNILPPTEIVQVKGIGELLEGL
IPYSQRHFSRIDRFVRSSFLLDYTLGEMSVIDPETVETEYPKDEKKKEKDVIAAMEQDTD
ELKQETPSRKRKSQKSKGKSNKKRLIAEAQGSVIAV
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcattcgttaaagaagaactacaggtgctcacgatctctaaagcagttctac
ggcggtggtcctttcattgtttcatctgatggttctttcatcgcctgcgcctgtggtgac
gtcattaacatcgttgattctacggattcatcagtgaaatccacgattgaaggcgagtcg
gatacgctcactgctttagctcttagtcctgatgataagctccttttctctgctggacat
agtagacaaatccgagtttgggatttggaaaccttgaaatgcattcgctcttggaaggga
cacgaaggacctgtgatgggaatggcttgccacgcatctggaggattgctagctactgct
ggagctgataggaaagttcttgtttgggatgttgatggtggtttctgcactcattatttc
agaggccataaaggggttgtgtcaagtatcctcttccatcctgattcaaacaaaaacatt
cttatctcgggaagtgatgatgcaaccgttcgtgtctgggatcttaatgcaaagaatact
gagaagaaatgtcttgccattatggagaagcacttttcagctgtgacttcaattgctcta
tcagaggatggattgactttattcagtgctggaagagataaagttgtgaacttgtgggac
cttcatgattatagctgcaaggctacagttgcaacgtatgaggtactagaagctgtgaca
acagtttcttctgggacgcctttcgcttcatttgtagcttctttggatcagaagaagagt
aagaagaaggaatctgattctcaagcaacatattttattactgttggtgaacgtggtgtt
gtgcgcatctggaagtctgaaggttcaatttgcctctatgagcaaaagtcgtcggatatt
actgtcagctcggatgatgaggaatctaaaagaggattcactgcagctgctatgctgcct
tctgatcacggactgctttgtgtgactgctgatcagcagttctttttctactccgttgtg
gaaaatgtggaagaaacagagttagtgctaagcaagaggctggttggatataatgaagaa
atagctgatatgaagttcctaggtgatgaagaacagtttctcgcagtagctacaaatctc
gaggaggttcgtgtatatgatgttgcaacaatgtcatgttcctacgtgttagctggccat
aaggaagttgttctgtccctcgacacttgcgtatctagttctgggaatgttctaatcgta
actggaagtaaagacaaaactgtaaggctatggaacgcaacaagcaaatcttgtatcgga
gttggtactggccataatggcgatatcttagcggttgcttttgcgaagaagtccttcagt
ttctttgtcagtggaagtggtgatcgtacactgaaggtctggagccttgatggtatttca
gaggactcagaggagcccattaatctgaaaactagaagtgttgtcgctgcccatgataaa
gacatcaattccgtggctgttgctcgtaacgatagcttagtttgcactggttctgaggat
cgtacagctagcatatggagactaccagacttggtacatgttgttacacttaaaggacac
aagaggcggattttttctgttgagttctcaactgttgatcagtgcgtaatgacagcttca
ggagataagacagtaaagatatgggctatatctgatggttcctgcctcaaaacatttgaa
ggtcatacctcaagtgtacttagggcctcatttataactgatggaacccaatttgtctca
tgtggtgccgatggtttgttgaaactttggaatgtgaacactagcgagtgcattgccaca
tatgaccagcacgaggacaaggtatgggctttagctgttggaaagaagacagaaatgatt
gcaactggtggaggtgatgcagttattaatttatggcatgattcaaccgcttcagataaa
gaagacgatttccgaaaagaggaagaagcaatcttgagaggtcaagagctggaaaacgca
gtgttagatgcggaatacactaaagctataagattagcatttgagctttgtaggcctcac
aaagtttttgagctcttcagtggtctctgcaggaaaagagattcagacgaacagatagtg
aaagctcttcaaggacttgaaaaagaagagttccgtctactttttgaatatgtccgagaa
tggaacacaaaaccaaagctatgccacattgctcagtttgttctttacaaaaccttcaac
atacttcctcccacagaaattgttcaggtaaaaggaattggggaactcctggaagggtta
atcccatatagtcagagacatttcagtagaattgacagatttgtaagaagcagtttcttg
ttagactacacacttggtgagatgtctgtgatcgatccagagactgttgagacagagtat
cctaaggacgagaagaaaaaagaaaaagatgtcattgctgcaatggaacaagacacagac
gagctaaagcaggagactccttcgaggaaacgaaagtctcagaaatccaaaggtaaatcg
aataagaagagactcattgccgaagcacagggaagcgtaattgcagtttga
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