Arabidopsis thaliana (thale cress): AT5G16780
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Entry
AT5G16780 CDS
T00041
Symbol
DOT2
Name
(RefSeq) SART-1 family
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT5G16780 (DOT2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT5G16780 (DOT2)
04121 Ubiquitin system [BR:
ath04121
]
AT5G16780 (DOT2)
Spliceosome [BR:
ath03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
AT5G16780 (DOT2)
Complex C
U4/U6.U5 tri-SnRNP specific factors
AT5G16780 (DOT2)
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
AT5G16780 (DOT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
Motif
Other DBs
NCBI-GeneID:
831541
NCBI-ProteinID:
NP_001318573
TAIR:
AT5G16780
UniProt:
Q9LFE0
A0A178UP47
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All DBs
Position
5:complement(5515707..5522261)
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AA seq
820 aa
AA seq
DB search
MEVEKSKSRHEIREERADYEGSPVREHRDGRRKEKDHRSKDKEKDYDREKIRDKDHRRDK
EKERDRKRSRDEDTEKEISRGRDKEREKDKSRDRVKEKDKEKERNRHKDRENERDNEKEK
DKDRARVKERASKKSHEDDDETHKAAERYEHSDNRGLNEGGDNVDAASSGKEASALDLQN
RILKMREERKKKAEDASDALSWVARSRKIEEKRNAEKQRAQQLSRIFEEQDNLNQGENED
GEDGEHLSGVKVLHGLEKVVEGGAVILTLKDQSVLTDGDVNNEIDMLENVEIGEQKRRNE
AYEAAKKKKGIYDDKFNDDPGAEKKMLPQYDEAATDEGIFLDAKGRFTGEAEKKLEELRK
RIQGQTTHTFEDLNSSAKVSSDYFSQEEMLKFKKPKKKKQLRKKDKLDLSMLEAEAVASG
LGAEDLGSRKDGRRQAMKEEKERIEYEKRSNAYQEAIAKADEASRLLRREQVQPFKRDED
ESMVLADDAEDLYKSLEKARRLALIKKEEAGSGPQAVAHLVASSTNQTTDDNTTTGDETQ
ENTVVFTEMGDFVWGLQRENDVRKPESEDVFMEEDVAPKAPVEVKEEHPDGLTEVNDTDM
DAAEDSSDTKEITPDENIHEVAVGKGLSGALKLLKDRGTLKEKVEWGGRNMDKKKSKLVG
IVDDDGGKESKDKESKDRFKDIRIERTDEFGRTLTPKEAFRLLSHKFHGKGPGKMKEEKR
MKQYQEELKLKQMKNSDTPSQSVQRMREAQAQLKTPYLVLSGHVKPGQTSDPQSGFATVE
KDVPGSLTPMLGDRKVEHFLGIKRKSEPGNSDTPPKRPKP
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggagaagtctaaatcaaggcatgaaatcagggaagagagggctgactacgag
ggttcgcctgttagagaacacagagatggaaggaggaaagagaaggatcataggagcaag
gataaagaaaaggactatgatcgagaaaagatcagggataaggaccaccgcagggataag
gagaaagagagagaccgaaaaagaagtagagatgaggacactgagaaggagatctctaga
ggtagagataaagagagggagaaagataagagtagagatcgggttaaagaaaaggacaag
gaaaaggaaagaaatagacataaagatagagaaaatgagagggataacgagaaggaaaaa
gacaaggatagggcaagagtcaaggagagagcgagtaagaaaagtcatgaagatgatgac
gagactcataaagctgcagaaagatatgaacattctgacaacagaggtctgaatgaaggt
ggcgataatgttgatgctgcatcaagtgggaaagaagcatctgcgttggaccttcagaat
cgcattttgaagatgagagaggaaagaaagaagaaagctgaagatgcttctgatgctcta
tcatgggttgcaaggagccgtaagattgaggaaaaacgaaatgctgagaagcaaagagca
cagcagctctcgagaatttttgaggagcaggacaatcttaatcaaggtgaaaatgaagat
ggcgaggatggcgagcatctatctggtgttaaagttctacatggtttggagaaagtggtg
gaaggtggagcagttatcttgacactaaaagaccaaagtgtccttaccgatggagacgtt
aacaatgagattgacatgctagaaaatgtggaaattggagaacagaagcgccggaatgaa
gcttatgaagcagccaagaagaaaaagggaatatacgatgataagtttaatgatgatccc
ggggcagaaaagaagatgcttcctcagtacgatgaggctgctactgatgaggggatcttt
ttggatgcaaagggtcgcttcaccggtgaagctgagaagaagctagaggagctgcgtaag
agaattcagggtcagacgacacatacttttgaagaccttaactcctcagcaaaggtctct
tcagattacttctcacaggaagaaatgctaaaattcaaaaaacccaagaaaaagaaacaa
ttgcgtaaaaaggataaattggacttaagtatgcttgaagcagaagctgttgcatcggga
ttgggagctgaagatcttggttctcgtaaagatggcagaaggcaggccatgaaagaagag
aaagaaaggatcgagtatgaaaaacggagcaatgcctatcaggaagccattgctaaagct
gatgaggcatccaggctacttagaagggaacaagttcagccttttaaaagagatgaagat
gagagtatggtgttggctgatgatgctgaagatctttacaaatcgttagagaaagctagg
aggctagctctcattaagaaagaggaagctggatctggtccacaggcagttgcgcatctt
gtggcttccagcaccaatcaaacaacagatgataataccaccaccggggatgagacacaa
gaaaatacagtggtttttacagagatgggagactttgtctggggtctccagcgcgagaac
gatgtgcggaagcctgaaagtgaagatgttttcatggaagaagatgtagcacccaaagct
cccgttgaagtaaaagaagagcatcctgatggtttgacagaagtaaatgacactgatatg
gatgcagcagaggattcatcagataccaaagagataacacctgatgaaaatatacacgag
gttgcggttggaaaaggattatctggtgcattgaagcttcttaaagaccgaggaacccta
aaggagaaggtcgaatggggtggtagaaatatggacaaaaaaaagagcaagcttgtgggt
attgtggatgatgatggaggtaaagaatctaaggataaagaatctaaggatagattcaag
gacatccggattgagaggactgacgagtttggtagaactttaactccaaaagaagccttt
cgactactctcgcacaaattccacgggaaggggcctggaaaaatgaaggaagagaaacgg
atgaaacagtaccaggaagagctcaagttaaagcaaatgaaaaactcagacacaccatcg
cagtctgttcaaagaatgagagaagctcaagctcaattgaaaactccttaccttgtcctc
agtggccatgtcaaaccaggacaaaccagtgatcctcagagtgggtttgcgactgttgag
aaggatgttcctggaagcttaacaccaatgcttggtgacagaaaggtggagcatttcttg
ggaataaagcggaaatcagagcccggaaactcggatacaccaccaaagagaccaaagcct
tga
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integrated database retrieval system
