Arabidopsis thaliana (thale cress): AT5G16790
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Entry
AT5G16790 CDS
T00041
Symbol
THO7
Name
(RefSeq) Tho complex subunit 7/Mft1p
KO
K13176
THO complex subunit 7
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AT5G16790 (THO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT5G16790 (THO7)
03041 Spliceosome [BR:
ath03041
]
AT5G16790 (THO7)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
AT5G16790 (THO7)
Spliceosome [BR:
ath03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
AT5G16790 (THO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
Het-C
mRNA_cap_C
Motif
Other DBs
NCBI-GeneID:
831542
NCBI-ProteinID:
NP_001331398
TAIR:
AT5G16790
UniProt:
Q8LDS5
A0A178UEM6
LinkDB
All DBs
Position
5:complement(5522417..5524011)
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AA seq
233 aa
AA seq
DB search
MSVRARRIVSGRSETVAANYAFDPLHDDKIIRNRLLTRTTTTRGEPPLKKLQKKFTSFVI
ELDKEEDNYSECGRLAKAFLQELSAFEIPLLKSQVVVAANLREKENFNELKDETNRQIMQ
AQADIEDLKKQLEESKIERQQKEECEAIRKLISAQPPRSETQKVIHELKKEIAELEAENT
ASWRLLELRKKQFALLLHVVDELQETMEDEQKSMVEEMQRNITADGAEAMSID
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgagagctaggaggattgtttcgggtagatcagagactgtagcagctaattat
gctttcgatccgttacatgatgacaaaattataagaaataggcttctcacacgcacgacc
accaccagaggcgaacctccattgaagaagcttcagaagaaattcacttcttttgttatt
gaactagacaaagaagaagataactacagtgagtgtggtaggctcgcgaaagctttcttg
caagaactctctgcgtttgagattccgcttcttaagagccaagtagttgtcgctgcaaat
cttagggagaaagagaactttaacgagcttaaagatgagacgaataggcagataatgcag
gcacaagctgatatagaagatcttaagaaacagcttgaggagagtaagatagagagacaa
cagaaagaggagtgtgaagccattaggaaacttatctctgcgcagccaccgaggtcagag
acgcagaaggttatacatgaattgaagaaggagattgcagaactcgaggctgagaataca
gcaagttggagacttcttgaactaaggaagaagcagtttgcattgttgttgcatgtggtg
gatgagttgcaggagacaatggaggatgaacagaagagtatggtggaagaaatgcagagg
aacattaccgctgatggcgctgaagccatgtccatcgattag
DBGET
integrated database retrieval system
