Arabidopsis thaliana (thale cress): AT5G17020
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Entry
AT5G17020 CDS
T00041
Symbol
XPO1A
Name
(RefSeq) exportin 1A
KO
K14290
exportin-1
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03008
Ribosome biogenesis in eukaryotes
ath03013
Nucleocytoplasmic transport
ath03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AT5G17020 (XPO1A)
03008 Ribosome biogenesis in eukaryotes
AT5G17020 (XPO1A)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
AT5G17020 (XPO1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT5G17020 (XPO1A)
03009 Ribosome biogenesis [BR:
ath03009
]
AT5G17020 (XPO1A)
03016 Transfer RNA biogenesis [BR:
ath03016
]
AT5G17020 (XPO1A)
03036 Chromosome and associated proteins [BR:
ath03036
]
AT5G17020 (XPO1A)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
AT5G17020 (XPO1A)
Ribosome biogenesis [BR:
ath03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
AT5G17020 (XPO1A)
Pre-60S particles
AT5G17020 (XPO1A)
Transfer RNA biogenesis [BR:
ath03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
AT5G17020 (XPO1A)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
AT5G17020 (XPO1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
mTOR_dom
Gpr1_Fun34_YaaH
Motif
Other DBs
NCBI-GeneID:
831565
NCBI-ProteinID:
NP_197204
TAIR:
AT5G17020
UniProt:
Q9SMV6
A0A178U9W2
LinkDB
All DBs
Position
5:5594632..5602969
Genome browser
AA seq
1075 aa
AA seq
DB search
MAAEKLRDLSQPIDVGVLDATVAAFFVTGSKEERAAADQILRDLQANPDMWLQVVHILQN
TNSLDTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFRSERLYVNK
LNVILVQIVKHDWPAKWTSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQ
KIKELKQSLNSEFKLIHELCLYVLSASQRQDLIRATLSALHAYLSWIPLGYIFESTLLET
LLKFFPVPAYRNLTIQCLTEVAALNFGDFYNVQYVKMYTIFIGQLRIILPPSTKIPEAYS
SGSGEEQAFIQNLALFFTSFFKFHIRVLESTPEVVSLLLAGLEYLINISYVDDTEVFKVC
LDYWNSLVLELFDAHHNSDNPAVSASLMGLQPFLPGMVDGLGSQVMQRRQLYSHPMSKLR
GLMINRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHDDTEKQML
RKLNKQLSGEEWAWNNLNTLCWAIGSISGSMAEDQENRFLVMVIRDLLNLCEITKGKDNK
AVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKR
KFVIVQVGENEPFVSELLTGLATTVQDLEPHQIHSFYESVGNMIQAESDPQKRDEYLQRL
MALPNQKWAEIIGQARHSVEFLKDQVVIRTVLNILQTNTSAATSLGTYFLSQISLIFLDM
LNVYRMYSELVSTNITEGGPYASKTSFVKLLRSVKRETLKLIETFLDKAEDQPHIGKQFV
PPMMESVLGDYARNVPDARESEVLSLFATIINKYKATMLDDVPHIFEAVFQCTLEMITKN
FEDYPEHRLKFFSLLRAIATFCFPALIKLSSPQLKLVMDSIIWAFRHTERNIAETGLNLL
LEMLKNFQQSEFCNQFYRSYFMQIEQEIFAVLTDTFHKPGFKLHVLVLQQLFCLPESGAL
TEPLWDATTVPYPYPDNVAFVREYTIKLLSSSFPNMTAAEVTQFVNGLYESRNDPSGFKN
NIRDFLVQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPNEIQDEMVDS
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgagaagttaagggacttgagccagccgattgacgtcggtgtgctcgatgcc
actgttgcggccttctttgttaccggatctaaagaagagagagctgctgcggaccagatt
ttgcgggatttgcaggctaatccagatatgtggcttcaagttgtccacattctacaaaat
acaaacagcttggataccaagttctttgctctgcaggttctagaaggtgttataaagtat
agatggaatgcactgcctgttgaacaacgagatggaatgaaaaattacatctcagaggtt
attgtacagctctcgagtaatgaagcatctttcagatcagaaaggctctatgtcaacaag
ctaaatgtcattttggtccagatcgtgaaacatgattggccggcaaagtggacaagcttc
attcctgatctagttgcagctgctaaaactagcgaaactatctgcgaaaattgcatggcc
attttgaaactcctaagtgaagaggtttttgatttctcaagaggagaaatgactcagcag
aagattaaagagctgaaacaatctctaaacagtgagtttaaactcattcatgagttatgc
ctatatgtcctctcagcttctcaaagacaggatcttatacgtgcaacactgtctgcattg
catgcctatctttcctggattccattgggttacatttttgagtctactttgcttgagacc
ctccttaaattttttcctgtgccagcatataggaacctcactattcaatgtctgaccgag
gtcgcagctcttaatttcggggacttctacaatgttcaatatgtcaaaatgtataccata
tttatagggcagctgcggataattctcccaccgagtacaaagatccctgaggcatattcc
agtggaagtggtgaagaacaagcatttatccagaacctggcactatttttcacttccttt
ttcaagtttcatattcgagtcctagaatcaacgccagaagttgtctctttgttactcgct
ggtctagaatatctcattaatatatcttatgttgacgacactgaagtatttaaggtttgt
ttggactattggaactcgttggtgttggagctatttgatgcgcatcataattctgataac
cctgcagtaagtgcaagcctgatgggtttgcagcctttccttcctggtatggttgatggc
cttggttctcaagtcatgcagcggcgtcaactttattctcacccaatgtccaaattaaga
gggttaatgattaaccgcatggcgaagcctgaagaagtgcttattgttgaagatgaaaat
gggaacatcgttcgtgaaaccatgaaggacaatgatgttcttgtccaatataagataatg
cgggagacattaatctacctctcacaccttgaccatgatgataccgagaagcagatgttg
aggaagctaaacaaacaattaagtggggaggaatgggcatggaacaatttgaacactttg
tgctgggctattgggtctatttccggatctatggcagaagatcaggaaaacaggtttttg
gtgatggtcattcgtgatttgttgaatttatgtgaaattaccaagggaaaagacaataaa
gccgttattgcaagcaacatcatgtatgtcgttggccagtatccaagattcttaagggcc
cattggaagtttttgaagacagttgtgaacaagttgtttgaattcatgcatgaaacacat
cctggtgttcaggacatggcctgtgatacattcttgaaaatagttcaaaagtgcaagcga
aaattcgttattgtacaggttggagagaatgaaccatttgtatctgaacttctaacaggc
cttgcaacaactgttcaagatcttgagcctcatcaaatacactcattttatgaatcagtt
ggtaatatgatccaagcagaatcagatcctcagaagagagatgaatatctccagaggttg
atggcactccccaaccagaaatgggcagaaatcataggacaggcacgccacagtgtagaa
ttcctcaaggatcaagttgtgatacgtacagtgctaaacatcctacagactaatactagt
gctgctacttcactgggaacatacttcttatcccaaatttccttgattttcttggatatg
ttgaatgtatacagaatgtacagtgagcttgtgtcaaccaacattactgagggaggacca
tatgcttccaagacatcttttgtaaaactcttaagatcggttaagagggaaacacttaag
ctgatagaaacctttttagacaaagctgaagaccagccacacatagggaaacaatttgtg
ccgccaatgatggaatcagtacttggtgactatgcgaggaatgtgcctgatgctagggaa
tccgaagttctttcactctttgcaacgattataaacaagtacaaggcaacaatgttagac
gacgtgcctcacatatttgaagctgtattccagtgtacattggagatgataactaagaac
tttgaagattatccagaacaccgcctcaagtttttctcattactccgtgctattgctacg
ttttgtttccctgccttgataaagttatcaagtccgcaactgaagctagtgatggattca
attatctgggcatttagacatactgagagaaatattgctgaaaccgggcttaatcttttg
cttgagatgctgaaaaactttcagcaatctgaattttgtaatcaattctaccggtcatac
tttatgcaaatcgagcaagaaatatttgccgttttgaccgataccttccataagcctggc
ttcaagctacatgtgttggtgctgcagcaactgttttgcctgcctgagagcggtgctttg
acagaacccttgtgggatgctacaaccgttccttacccgtatccggacaacgttgcattt
gttcgcgaatacaccattaagctactgagctcttcattcccaaacatgactgcagcagag
gtcacacaatttgtgaatggactatacgagtctagaaatgacccgtctggatttaagaat
aacattcgtgacttccttgtacagtctaaggagttttccgctcaggataacaaagatctc
tatgctgaggaagcagctgcacagagagagagagaacgtcaaagaatgctttcaattcct
gggcttattgctcctaatgagattcaagacgagatggtggactcataa
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