KEGG   Arabidopsis thaliana (thale cress): AT5G17200
Entry
AT5G17200         CDS       T00041                                 
Name
(RefSeq) Pectin lyase-like superfamily protein
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00040  Pentose and glucuronate interconversions
ath01100  Metabolic pathways
Module
ath_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:ath00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    AT5G17200
Enzymes [BR:ath01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     AT5G17200
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim End_N_terminal
Other DBs
NCBI-GeneID: 831584
NCBI-ProteinID: NP_197222
TAIR: AT5G17200
UniProt: Q9FFI9
LinkDB
Position
5:complement(5653524..5655336)
AA seq 421 aa
MKSSLFFVLLCLFQINKLCFCLEEESLKVKNGFGSNGFISVTSFGAIGDGKTDDTKAFLK
AWEAVCKGGHNRKILVPQGKTFMLKPLTFIGPCKSSTISLSIRGNLVAPGYTWYAGRYTT
WISFDSINGLVVTGGGTIDGRGSLWWGNVNNRPCAMHFNNCNGLRISNLRHLNSPRNHVG
LSCSQNIEVRGLRMTAPGDSPNTDGIDISNCIGVHIHDSVIATGDDCIAINSGSSHINIT
GIFCGPGHGISVGSLGVTGDFETVEEVRVKNCTFTKTQNGVRIKTYQNGSGYARKISFED
INMVASENPIIIDQTYHNGGTNGGISKSSSSYQNCHLTAKQRTPSGNGKGVKVTDVRYAR
IRGSSASDQDITLNCDADLGCSDIVMDNVNMVSATFGHKLFSSCKNAHGSLFASKVDCLK
H
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaaatcttcgttgttctttgtcttgttatgtttgtttcaaataaacaaattatgtttc
tgcttagaagaagaatctctaaaggttaaaaacggatttggaagcaatggattcataagt
gtcactagtttcggagctattggcgatggaaagactgatgatactaaggcttttcttaaa
gcatgggaagctgtatgcaaaggaggacacaatagaaagattcttgtgcctcaagggaaa
accttcatgcttaagcctcttacattcatcggtccatgcaagtcttcgaccatctcctta
tcgataagaggtaatcttgtggcaccgggttacacttggtatgcgggaagatacacaaca
tggattagttttgacagtatcaatggtcttgttgtcaccggaggtggtaccatcgacggt
cgtggttctttgtggtggggcaacgttaataatcgcccctgcgcaatgcacttcaacaac
tgtaatggtcttaggatatctaatctccgacatttgaacagccctcggaaccatgtaggt
ctaagttgttcacagaacatcgaggtcaggggtttaaggatgacagcacccggtgatagt
ccaaacacggatggtattgacatatcgaactgtataggagtccacatacatgactcagtg
attgccactggagatgactgcatcgccattaatagcggttcctctcatatcaacataacc
ggcattttttgtggccccggtcacggtatcagcgtaggaagtcttggagtaactggagat
ttcgaaactgttgaagaagtgagggtaaagaactgcacttttacaaaaacacagaacggt
gtccgaatcaagacataccagaacggatcgggatatgctcggaaaatctcattcgaggat
atcaacatggttgcctcagagaaccctattatcatagaccagacttaccacaatggaggt
acgaacggaggaataagcaagtcatctagtagctatcagaactgtcatttaacagcaaaa
caacggactccgtctggtaatgggaaaggcgtgaaagtgactgacgtgcgttacgctaga
atccgtgggtcatctgcaagcgatcaagacattacattgaactgcgatgcagacttggga
tgctcagatatagtgatggacaatgtgaatatggtttcagcgacatttggtcacaagttg
ttttcttcctgcaaaaatgctcatgggtctttatttgcttcaaaagtggattgtctgaaa
cattaa

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