Arabidopsis thaliana (thale cress): AT5G17370
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Entry
AT5G17370 CDS
T00041
Name
(RefSeq) Transducin/WD40 repeat-like superfamily protein
KO
K11799
DDB1- and CUL4-associated factor 4
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT5G17370
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
AT5G17370
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_DCAF4
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_TEP1_C
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR3_2nd
Motif
Other DBs
NCBI-GeneID:
831603
NCBI-ProteinID:
NP_001318582
TAIR:
AT5G17370
UniProt:
F4KGZ4
LinkDB
All DBs
Position
5:complement(5721801..5724751)
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AA seq
512 aa
AA seq
DB search
MVSDEKEHREQSRLQVRHNMKPELPGFYYDEEKNRYFPIKGPIPGAKSSSSSRTKQKPEP
KPEQETNYQKRTKLKALKLVYSRELNGNVISVNKKMSNFRDEIQKTQASYPVVWRYGSTE
DIGDTALKQFQVDVQTPVGLTRKNILVAGSAGGCLSILRVSKDRQVYDGVIECDPVSVLP
CKENDTEEREAPEHILRPTQPCLVALSSISSIELIGRSDASENSHPVNRALITTLGSTGR
GSIFILNVAEEVNILTPRSLQGNVSSECTIWTSDCNISGSHAAIGTDLGAGLVDLETGVG
SYFLRSKSDVFALQFHQSGNIVHCGLRNGAIVSVDLRERPGRPFPRLTRHQIRYQSSSKT
GLTSTKKQWFELQGNINPSHVIYMPSSLTCLKTLKTSDQYLMASSMDGTIKLYDQRMVKR
GVGVQTYEGHVNSHTPIEFGIDPSERFILSGGDDCYTRIWSIKSGQLMSENKFSNSVPSV
VCWSADERQRDRKDSIGHGAWLGSREAIFNLL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgatgagaaagaacacagagaacagagtcgactccaagtccgacacaacatg
aaaccagaacttcctgggttttattacgacgaggagaagaacagatattttcccattaaa
ggtcctatccctggtgcaaagtcttcttcttcttcaagaacgaaacaaaaacccgagcca
aagcctgaacaggaaactaattatcagaagaggactaaactaaaagcattgaagctagtt
tattcccgagagttaaatggcaatgttatttctgtcaacaagaagatgtctaacttcagg
gacgagattcaaaagacacaagcttcttatcctgtggtatggagatacggatccacagaa
gacattggcgataccgctttgaaacagtttcaggttgatgtacaaacacctgtaggcttg
accagaaagaacatcctagtagcaggcagtgctggtggttgcttgagcattctaagagtt
tccaaagatagacaagtatacgatggtgtaatcgagtgtgatccagtttctgttcttcct
tgcaaagaaaacgatacagaagagagggaagcacctgagcatatattgagacctacgcaa
ccttgtctggtcgccttatcttctatatcttctattgagttaatcggaagatctgatgca
tctgaaaactcccaccccgtaaaccgggcattaataactacattgggatcaactggccgt
gggtcgatttttatcttaaatgttgctgaggaagtgaacatacttactccgcgaagcctc
caagggaatgtttcctctgagtgtaccatttggacatctgattgcaatataagtgggagt
catgcagctattggtaccgacttaggagctggtttggttgatttggaaacaggagtaggt
tcatactttcttcgaagcaaaagcgatgtttttgctctacaatttcatcaatcgggaaac
attgttcattgcggactcagaaatggagccattgtgtcagttgatctacgtgagagacca
ggtagaccttttccaaggctcactagacaccagatacgatatcaatcatcgagtaaaacc
ggtctaacttctacaaagaaacaatggttcgagctccaaggaaacataaacccgtctcat
gtaatctatatgccgtcatctcttacatgcctgaagacactaaaaacttctgatcaatac
ttaatggcaagctccatggatggaacaatcaagctatacgatcaacgcatggttaagaga
ggggtcggtgtacagacatatgaaggacatgtaaattctcatactcccatcgaatttggc
atcgacccgtcagaaagatttattttgtcaggaggagatgactgctatactcgcatttgg
agtatcaaatctggtcaacttatgtctgaaaataaattctccaactctgtcccttcagtt
gtgtgttggtctgctgatgaaagacaaagagaccggaaagatagcattggtcacggggca
tggcttggatcacgcgaagcgatattcaacttgttgtaa
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