Arabidopsis thaliana (thale cress): AT5G20730
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Entry
AT5G20730 CDS
T00041
Symbol
NPH4
Name
(RefSeq) Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein
KO
K14486
auxin response factor
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
AT5G20730 (NPH4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
PB1
Motif
Other DBs
NCBI-GeneID:
832196
NCBI-ProteinID:
NP_851047
TAIR:
AT5G20730
UniProt:
P93022
Structure
PDB
PDBj
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All DBs
Position
5:complement(7016445..7022179)
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AA seq
1164 aa
AA seq
DB search
MKAPSSNGVSPNPVEGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQK
QTDFIPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLN
RQPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFR
HIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVI
SSDSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMI
FETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLT
PFYICPPPFFRPRFSGQPGMPDDETDMESALKRAMPWLDNSLEMKDPSSTIFPGLSLVQW
MNMQQQNGQLPSAAAQPGFFPSMLSPTAALHNNLGGTDDPSKLLSFQTPHGGISSSNLQF
NKQNQQAPMSQLPQPPTTLSQQQQLQQLLHSSLNHQQQQSQSQQQQQQQQLLQQQQQLQS
QQHSNNNQSQSQQQQQLLQQQQQQQLQQQHQQPLQQQTQQQQLRTQPLQSHSHPQPQQLQ
QHKLQQLQVPQNQLYNGQQAAQQHQSQQASTHHLQPQLVSGSMASSVITPPSSSLNQSFQ
QQQQQSKQLQQAHHHLGASTSQSSVIETSKSSSNLMSAPPQETQFSRQVEQQQPPGLNGQ
NQQTLLQQKAHQAQAQQIFQQSLLEQPHIQFQLLQRLQQQQQQQFLSPQSQLPHHQLQSQ
QLQQLPTLSQGHQFPSSCTNNGLSTLQPPQMLVSRPQEKQNPPVGGGVKAYSGITDGGDA
PSSSTSPSTNNCQISSSGFLNRSQSGPAILIPDAAIDMSGNLVQDLYSKSDMRLKQELVG
QQKSKASLTDHQLEASASGTSYGLDGGENNRQQNFLAPTFGLDGDSRNSLLGGANVDNGF
VPDTLLSRGYDSQKDLQNMLSNYGGVTNDIGTEMSTSAVRTQSFGVPNVPAISNDLAVND
AGVLGGGLWPAQTQRMRTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDP
QTSDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGVPVTNQA
CSGGDSGNAWRGHYDDNSATSFNR
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctccttcatcaaatggagtttctcctaatcctgttgaaggagaaaggagaaat
ataaactcagagctatggcacgcttgtgctgggccattgatttcgttgcctccagcagga
agtcttgttgtttacttccctcaaggtcacagtgagcaagtcgcggcttcaatgcagaag
cagactgatttcataccaagttacccgaatcttccttccaagctcatatgcatgctccac
aatgttacactgaatgctgatcctgagacggatgaggtctatgcgcagatgactcttcag
ccagtaaacaaatatgacagagatgcattgcttgcttctgacatgggtcttaagctaaac
agacaacctaatgaatttttctgcaaaaccctcacggcgagtgacacaagtactcacggt
ggattttctgtaccccgacgagctgctgagaaaatctttcctgctctggatttctcgatg
caaccaccttgtcaggagcttgttgctaaggatattcatgacaacacatggactttcaga
catatttatcgaggtcaaccaaaaaggcacttgctaactacaggctggagtgtgtttgtc
agcacgaaaaggctctttgctggagactctgttctttttataagagatggaaaggcgcaa
cttctgttggggataagacgtgcaaatagacaacagcctgcactttcttcatctgtaata
tcaagtgatagcatgcacatcggagttcttgcagctgcagctcatgctaatgctaataac
agtcctttcaccattttctacaacccgagggctgctcctgctgagtttgtggttccttta
gccaagtataccaaagcgatgtacgctcaagtttccctcggtatgcggtttagaatgata
tttgagactgaagaatgtggagttcgtcggtatatgggtacagttaccggtatcagtgat
cttgatccagtgagatggaaaaactctcagtggcggaatcttcagattggatgggatgag
tcagctgctggtgataggcccagtcgagtttcagtttgggacattgaaccggttttaact
cctttctacatatgtcctcctccatttttccgacctcgcttttctggacaacctggaatg
ccagatgatgagactgacatggagtctgcactgaagagagcaatgccatggcttgataat
agcttagagatgaaagacccttcgagtactatctttcctggtctgagtttagttcagtgg
atgaatatgcagcagcagaacggccagctaccctctgctgctgcacagccaggtttcttc
ccatcaatgctttcgccaaccgcggcgctgcacaacaatcttggcggcactgatgatccc
tccaagttactgagctttcagacgccgcacggggggatttcctcctcaaatctccaattt
aacaaacagaatcagcaagccccaatgtctcagttgcctcagccaccaactacgttgtcc
caacaacagcagctgcagcaattgttgcactcctctttgaaccatcaacaacagcaatcg
cagtctcaacaacagcaacaacaacaacagttgctgcagcagcaacaacaattgcagtct
caacaacacagcaacaacaatcaatcgcagtctcagcaacaacaacaattgctccagcag
caacaacaacaacaactgcagcaacaacatcaacaaccgttacagcaacagactcagcag
cagcagctaagaacacagccattgcaatctcactcgcatccacagccacaacagttacaa
caacataagttgcagcaacttcaggttccacagaatcagctttacaatggtcaacaagca
gcgcagcagcatcagtcgcaacaagcatctacacatcatttgcaaccacaattagtttcg
ggatcaatggcaagcagtgtcatcacgcctccgtccagctcccttaatcaaagctttcaa
cagcaacaacaacagtctaagcaacttcaacaagcacatcaccatttaggtgctagcact
agccagagtagtgtaattgaaaccagcaagtcttcatccaatctgatgtccgcaccgccg
caagagacacagttttcacgacaagtagaacagcagcagcctcctggtctcaacgggcag
aatcagcaaacacttttgcagcagaaagctcaccaggcacaggcccaacagatattccag
cagagtctcttggaacagccgcatatacagtttcagctgttacagagattacaacagcaa
cagcagcagcaatttctttcgccgcagtctcagttaccacaccatcaattgcaaagccag
cagttgcaacagctgcctactctctctcaaggtcatcagtttccgtcatcttgcactaac
aatggcttatcgacgttgcaaccacctcaaatgctggtgagccgacctcaggaaaaacaa
aacccaccggttgggggaggggtcaaagcttattcaggcatcacagatggaggagatgca
ccttcctcttcaacgtcgccttccaccaacaactgtcagatctcttcttcaggctttctc
aacagaagccaaagcgggccagcgatcttgatacctgatgcagcgattgatatgtctggt
aatcttgttcaggatctttacagcaaatccgatatgcggctaaaacaagaactcgtgggt
cagcaaaagtccaaagctagtttaacagatcatcaactagaagcatctgcctctggaact
tcttacggtttagatggaggcgaaaacaacagacaacaaaatttcttggctccaactttt
ggccttgacggtgattccaggaacagcttgctcggtggagctaatgttgataatggcttt
gtgcctgacacgctactctcgaggggatatgactcccagaaagatcttcagaacatgctt
tcaaactatggaggagtgacaaatgacattggtacagagatgtctacttcagctgtaaga
actcaatcttttggtgtccccaatgtgcccgccatttcgaacgatctagctgtcaacgat
gctggagttcttggtggtggattgtggccagctcagactcagcgaatgcgaacttataca
aaggtgcaaaaacgaggctcagtggggagatcaatagacgtcaaccgttacagaggttac
gatgagctgaggcatgatctagcgcgcatgtttgggatcgaaggacagctcgaagatcct
caaacatctgactggaaacttgtttatgtcgatcatgaaaatgacatcctcctcgtcggc
gatgatccatgggaagaattcgtaaactgtgttcagagcattaagatcctttcatcagct
gaggttcagcagatgagcttagacgggaactttgccggtgtaccagttactaatcaagct
tgtagtggcggtgacagtggcaatgcttggagaggtcattatgatgataactcagccact
tcgtttaaccggtga
DBGET
integrated database retrieval system
