Arabidopsis thaliana (thale cress): AT5G21030
Help
Entry
AT5G21030 CDS
T00041
Name
(RefSeq) PAZ domain-containing protein / piwi domain-containing protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT5G21030
03036 Chromosome and associated proteins [BR:
ath03036
]
AT5G21030
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
AT5G21030
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
AT5G21030
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
AT5G21030
microRNA pathway
RISC loading complex
AT5G21030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
832227
NCBI-ProteinID:
NP_197602
TAIR:
AT5G21030
UniProt:
Q3E984
LinkDB
All DBs
Position
5:complement(7139817..7144272)
Genome browser
AA seq
850 aa
AA seq
DB search
MDTTLPPPQHMEREPLKSKSSLLPMTRRGNGSKGQKILLLTNHFRVNFRKPNSHNFFHYS
VTITYEDGSPLLAKGFGRKILEKVQQTCQADLGCKHFAYDGDKNLYTVGPLPRSSLDFSV
VLETAPSRRNADKRLKLPHQSKKFNVAILFAPPEIPMEAIANALQGKKTKHLLDAIRVMD
CILSQNAARQGCLLVRQSFFHNDAKYFANIGEGVDCCKGFHSSFRTTQGGLSLNIDVSTA
MIVKPGPVVDFLIANQGVNDPFSINWKKAKNTLKNLRVKVLPSNQEYKITGLSGLHCKDQ
TFTWKKRNQNREFEEVEITVSDYFTRIREIELRYSGGLPCINVGKPNRPTYFPIELCELV
SLQRYTKALTKFQRSNLIKESRQNPQQRIGVLTRALKTSNYNDDPMLQECGVRIGSDFTQ
VEGRVLPTPKLKAGKEQDIYPINGSWNFKNKPATVTRWAVVNFSARCDPQKIIDDLTRCG
KMKGINVDSPYHVVFEENPQFKDATGSVRVDKMFQHLQSILGEVPPKFLLCILEKKNSDV
YEKSCSMWNCECIVPPQNLNDQYLTNLLLKINAKLGGLNSVLDMELSGTMPLVMRVPTII
IGMDVSHGSPGQSDHIPSIAAVVSSREWPLISKYRACVRTQSPKVEMIDSLFKPVSDKDD
QGIMRELLLDFHSSSGKKPNHIIIFRDGVSESQFNQVLNIELDQMMQINHHTKFFQTESP
NNVLPGTIIDSNICHQHNNDFYLCAHAGKIGTTRPTHYHVLYDEIGFDTDQLQELVHSLS
YVYQRSTTAISLVAPICYAHLAAAQMATAMKFEDMSETSSSHGGITTAGAVPVPPMPKLN
TNVASSMFFC
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggatacgactctaccgcctcctcaacacatggaacgtgaacctttgaagagcaagagt
agtcttcttccaatgactcgccgtggcaacggttccaaaggacagaagattcttctgctc
actaaccacttcagagtcaacttcagaaaaccaaacagtcataatttcttccattacagc
gttactatcacatatgaagatggtagtccacttttagccaaaggttttggcagaaagatt
cttgaaaaagttcaacagacttgtcaagctgatttgggttgcaaacattttgcttatgat
ggcgacaagaatctttatactgttggtcctcttcctagatccagtctagacttctctgtt
gttcttgaaaccgcgccttctaggagaaacgcagacaaaagactaaagcttcctcaccaa
tccaagaaattcaatgttgcaatcctttttgcgcctccagaaatcccaatggaagctatt
gcaaatgctcttcaaggaaagaaaactaaacatcttctagatgctatcagagtgatggac
tgtattttgagccaaaatgcagctagacaaggttgcctcctagttcggcaatctttcttc
cacaatgacgcaaagtactttgcgaatatcggtgaaggtgtagattgttgcaaaggattt
cattcaagcttcagaactactcagggaggcttgtccctcaatattgatgtttcgactgct
atgatagtaaaacctggtcctgttgttgattttcttattgcaaatcaaggtgtgaacgat
ccattctctattaactggaaaaaggctaaaaatactctgaaaaatcttagagttaaagtc
ctcccttcaaatcaagaatacaagataaccggactaagtggactacactgcaaagatcaa
acgtttacttggaagaaaaggaaccaaaacagggaatttgaggaggttgagattacagtg
tccgattacttcactaggatccgtgaaatcgaactgcgttactcgggtggcttaccttgt
atcaatgttggtaagccaaatcgtcctacctactttcccattgagctctgtgagcttgta
tctctacaacgctatactaaagcgctaaccaaattccagaggagtaaccttatcaaagaa
tcaaggcagaatccacaacaaagaattggtgtgttaaccagagctctcaagactagtaat
tataatgatgacccaatgttgcaagaatgtggtgttaggattggctctgacttcactcaa
gtcgaaggccgcgtgttaccaacaccaaagcttaaagctggcaaagaacaagacatctat
cctattaatgggagttggaacttcaagaacaagccagccacagttactagatgggctgtt
gtgaacttctctgctcgctgtgacccgcaaaagattattgatgatttgaccagatgtgga
aagatgaaaggaattaacgtagattctccataccatgtcgtctttgaagaaaatcctcag
tttaaggatgccactggttctgtaagagttgataagatgtttcaacatttacaatcaata
ctcggcgaagttcctccaaaattccttctatgcatactcgaaaagaaaaactctgatgtt
tatgaaaaatcttgttcaatgtggaattgtgaatgtattgttcctcctcaaaacttaaat
gatcagtatctcacaaatcttctactaaagataaatgccaagcttggtggattgaattca
gttttggatatggagctgtcaggaacaatgcctctggtaatgagagttcctaccatcatt
attggaatggatgtatctcatggttctcctggacagtctgatcatataccatccattgcc
gcggttgtgagctccagagagtggccactgatctcaaaatacagggcttgtgtgcgtaca
cagtcgcctaaagttgaaatgatcgatagcctctttaaacccgtctctgacaaagatgat
caaggtatcatgagagagctcttgcttgactttcactcaagttctggaaagaaaccgaat
cacattatcattttcagggatggtgtcagtgaatctcagtttaaccaagttcttaatatt
gaactggatcagatgatgcaaataaaccaccacacgaagttcttccaaaccgaaagccct
aataatgttcttccaggaacaataattgacagcaacatctgtcaccaacacaacaacgat
ttctatctttgtgctcatgctggaaagattggaactacaaggccaacacattaccatgtg
ctctacgacgagattggatttgacacagatcaactccaagaacttgtgcattcactatcc
tatgtctaccagcggagcacaactgccatctctcttgttgcgccgatatgttatgctcat
ttggcggctgcacagatggcaactgcaatgaagtttgaggacatgtctgagacttcatcg
agccacggcgggatcaccacagctggagcagtccctgtgcctcccatgccgaagctgaac
accaacgttgctagttcaatgttcttttgctga
DBGET
integrated database retrieval system
