Arabidopsis thaliana (thale cress): AT5G22010
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Entry
AT5G22010 CDS
T00041
Symbol
RFC1
Name
(RefSeq) replication factor C1
KO
K10754
replication factor C subunit 1
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03030
DNA replication
ath03410
Base excision repair
ath03420
Nucleotide excision repair
ath03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AT5G22010 (RFC1)
03410 Base excision repair
AT5G22010 (RFC1)
03420 Nucleotide excision repair
AT5G22010 (RFC1)
03430 Mismatch repair
AT5G22010 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ath03032
]
AT5G22010 (RFC1)
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT5G22010 (RFC1)
DNA replication proteins [BR:
ath03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
AT5G22010 (RFC1)
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
AT5G22010 (RFC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_lid_RFC1
PTCB-BRCT
AAA_22
AAA_30
RCF1-5-like_lid
AAA_19
HP_1247_M
Rad17
AAA_5
BRCT_2
AAA_18
nSTAND3
Gp44_lid
RuvB_N
AAA_16
Zeta_toxin
Sigma54_activ_2
AAA_17
AAA_assoc_2
AAA_14
AAA_28
TsaE
NTPase_1
Motif
Other DBs
NCBI-GeneID:
832261
NCBI-ProteinID:
NP_680188
TAIR:
AT5G22010
UniProt:
Q9C587
LinkDB
All DBs
Position
5:complement(7280321..7287434)
Genome browser
AA seq
956 aa
AA seq
DB search
MSDIRKWFMKAHEKGNGSAPKSTSSKAGPVKNAAETAPIKSEQASEDLETADRRKTSKYF
GKDKTKVKDEKEVEAIPAKRKLKTESDDLVKPRPRKVTKVVDDDDDDFDVPISRKTRDTT
PSKKLKSGSGRGIASKTVDNDDDDDGEDKETPLKSAGRGRGGRAAPGASTGGRGRGGGRG
GFMNFGERKDPPHKGEKEVPEGTPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRITGS
VSKKTTYLLCDEDIGGRKSEKAKELGTKFLTEDGLFDIIRSSKPVKKSLPERSNKGTEKI
CAPPKTSPQKEETRGKPLAKSSPKKVPPAKGKNKIIETSLPWTEKYRPKVPNEIVGNQSL
VTQLHNWLSHWHDQFGGTGSKGKGKKLNDAGSKKAVLLSGTPGIGKTTSAKLVSQMLGFQ
AVEVNASDSRGKANSNIAKGIGGSNANSVKELVNNEAMAANFDRSKHPKTVLIMDEVDGM
SAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPLNYRKPTKQQMAKRLMH
IAKAEGLEINEIALEELAERVNGDIRLAVNQLQYMSLSMSVIKYDDIRQRLLSSAKDEDI
SPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLLIQENYLNYRPSGKDEAKRMDLLAR
AAESIADGDIINVQIRRYRQWQLSQSCCVASSILPASLLHGSREVLEQGERNFNRFGGWL
GKNSTAGKNRRLMEDLHVHVLASRESSAGRETLRVDYLPLLLSRLTSPLQTLPKDEAVSE
VVDFMNSYSISQEDFDTILELGKFKGRENPMEGVPPPVKAALTKKYNEMNKTRMVRVADM
VQLPGVKKAPKKRIAAMLEPTVDSLRDEDGEPLADNEEGNGSDAEEDSEEATDGEKLESN
LKNLNARGIQVELDLKGAGSSGSRKAAGKGRGRGKAADTSAEKKATGRGSGAKRKR
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatattaggaagtggtttatgaaagctcatgaaaaagggaatggaagtgctccg
aaatcgacgtcttccaaggcaggtcctgtgaagaatgctgcagagactgcaccaataaaa
tcagagcaggctagtgaagacttggaaactgctgatagaagaaaaacgagcaagtatttt
ggtaaagataaaacaaaagttaaagatgagaaagaggtggaagcaattcctgccaagagg
aaacttaagactgagtctgatgatttagtcaagcctcgtccaagaaaggttacaaaggtt
gttgatgatgatgatgatgattttgatgtacctatttcaaggaagactcgtgataccact
cccagcaaaaaactaaagtcggggtcaggtagaggaattgcaagtaaaactgttgataac
gacgatgatgatgatggtgaagataaggagactcctctaaaatctgccggaagaggccgt
ggcggtagagctgctccaggggcctcaactggtggaagaggtagaggtggagggcgaggt
ggatttatgaattttggtgaaaggaaagacccaccgcataaaggagaaaaggaagttcct
gaaggcacccctgattgcttagctggattgacatttgtaattagcggaacacttgacagt
ttagaaagagaagaagcagaagatctgattaagcggcatggtggtcgtattacaggctct
gttagcaagaaaacgacctaccttttgtgtgatgaagacattggcggaaggaaatctgaa
aaagctaaagagctgggcactaagttccttacagaggatggcctatttgacataatccgg
tcctctaaacctgtaaaaaagtctctacctgaaaggtcaaacaaaggcactgaaaaaatc
tgtgcaccaccgaagacaagtcctcagaaagaagaaacaagaggaaaacctttggcaaaa
agttcgcccaaaaaggtccccccggcgaaaggaaaaaataaaattatcgagacttccttg
ccctggacggaaaaatacagaccgaaggttccaaatgagattgttgggaatcagtcgttg
gttactcaacttcacaactggctgtcccactggcatgatcaatttggaggtactggaagt
aaaggaaaggggaagaaattgaatgatgctggttccaagaaagctgtacttttgagtgga
acacctggtattggaaaaacaacatcagcaaagttggttagtcagatgcttggtttccag
gcagttgaggttaatgctagtgacagtcgtggaaaggcgaactcgaatattgccaaagga
attggtggcagcaatgcaaattctgtaaaagaacttgtcaataacgaagccatggctgcc
aacttcgataggtcaaagcacccgaagactgttctaatcatggatgaagtagatggaatg
tctgcaggcgacaggggaggtgttgcagatcttattgctagcattaaaatatcaaagatt
cctatcatctgcatttgtaatgaccgatatagtcaaaaactgaagagtttagtaaactac
tgtcttcccctcaattaccggaagcccacgaaacagcagatggcaaaaaggctgatgcat
attgctaaggcagaaggccttgaaattaatgaaattgccctggaagaactcgctgagaga
gtgaatggtgacatacgattggccgtaaatcagctccaatatatgagcctgtccatgtca
gtcatcaaatacgatgatatcaggcagcgcctgctaagcagtgcgaaggatgaagatatt
tcccctttcacagctgttgacaagttgtttggttacaatggtgggaagctgagaatggat
gaacggattgacctaagcatgagtgatccggatttggttcccctacttatacaggaaaac
tatctcaattataggccaagcggtaaagatgaggcaaaacgaatggatttactcgctcgt
gctgctgaatctattgccgatggagatattatcaacgtgcagattcgaagatacagacaa
tggcagctctctcaatcttgctgtgttgcatcttctattctcccagcttcattgttgcat
ggatcaagggaggtactcgagcagggagagcgtaatttcaatagatttggtgggtggctt
ggcaagaattctactgcgggaaaaaatagacggttaatggaggatctgcatgttcatgtc
cttgcttcccgtgaatccagcgctggaagggagacacttcgtgttgattatcttcccctt
ctcttgagccgcttgactagcccacttcagacactgcctaaggatgaagcagtttcagaa
gttgttgatttcatgaactcctactctataagccaggaggactttgatactattttggag
ttgggaaaatttaagggacgtgaaaatccgatggagggtgttccacctccagttaaagca
gctttgaccaaaaaatataatgagatgaataaaaccagaatggtacgtgtggcggacatg
gtgcagcttccgggagtgaaaaaggcgccaaagaagcgaatagctgctatgctggaacca
actgttgatagtttgagagatgaagatggtgagccgttagcagataatgaagaaggaaat
ggatcagacgctgaagaagactcagaagaagcaaccgatggagaaaagctggagtccaat
cttaaaaatctgaatgctagagggatccaagtggaattggatttgaaaggagctggaagc
tcaggttcaagaaaggcggctggtaaaggcagaggcagagggaaagcagctgatacgtct
gctgagaagaaagctacaggaagaggctctggtgccaagagaaagagataa
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integrated database retrieval system
