Arabidopsis thaliana (thale cress): AT5G22330
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Entry
AT5G22330 CDS
T00041
Symbol
RIN1
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolases superfamily protein
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
AT5G22330 (RIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ath03036
]
AT5G22330 (RIN1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ath03037
]
AT5G22330 (RIN1)
Enzymes [BR:
ath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AT5G22330 (RIN1)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
AT5G22330 (RIN1)
Chromatin remodeling factors
SRCAP complex
AT5G22330 (RIN1)
INO80 complex
AT5G22330 (RIN1)
INO80 complex (yeast)
AT5G22330 (RIN1)
SWR1 complex
AT5G22330 (RIN1)
ASTRA complex
AT5G22330 (RIN1)
Cilium and associated proteins [BR:
ath03037
]
Motile cilia and associated proteins
Dynein assembly factors
AT5G22330 (RIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
AAA_19
AAA_18
Mg_chelatase
bpMoxR
AAA_25
Cdc6_lid
DnaB_C
TsaE
GvpD_P-loop
AAA_7
nSTAND3
AAA_28
ResIII
Zeta_toxin
AAA_11
NPHP3_N
IstB_IS21
Rad17
Motif
Other DBs
NCBI-GeneID:
832293
NCBI-ProteinID:
NP_197625
TAIR:
AT5G22330
UniProt:
Q9FMR9
A0A178UK47
Structure
PDB
PDBj
LinkDB
All DBs
Position
5:complement(7390796..7394280)
Genome browser
AA seq
458 aa
AA seq
DB search
MEKVKIEEIQSTAKKQRIATHTHIKGLGLEPTGIPIKLAAGFVGQLEAREAAGLVVDMIK
QKKMAGKALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFR
RAIGLRIKETKEVYEGEVTELSPEETESLTGGYGKSISHVVITLKTVKGTKHLKLDPTIY
DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQD
VTLQDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAELVPG
VLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGVCNVRGTDMPSPHGVPIDLLDRL
VIIRTQIYDPSEMIQIIAIRAQVEELTVDEECLVLLGEIGQRTSLRHAVQLLSPASIVAK
MNGRDNICKADIEEVTSLYLDAKSSAKLLHEQQEKYIS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagtaaagattgaagaaattcagtccaccgctaagaaacaacggattgctact
cacacccatatcaaaggccttggcctcgagccaactggtatccctataaaattggcagct
ggatttgttggtcaacttgaggctagagaggcagctggtcttgtagttgacatgattaag
cagaagaaaatggcgggcaaggctcttttgcttgctggacctcctggaactgggaaaaca
gctttggctcttggaatctctcaagagctgggaagcaaggttccattctgtccaatggtt
ggatctgaggtttactcatcagaggttaagaaaacagaggttctcatggagaattttaga
cgtgccattggtctacgtatcaaggaaaccaaagaagtctatgaaggggaggtcaccgag
ctgtcaccagaagaaactgaaagcctcactggaggttatggtaaaagcatcagccatgtt
gtaattacactcaagacagtcaaaggaaccaaacatctgaaattggatcccactatctat
gatgccttgattaaggaaaaggtagctgtaggagatgtaatctatatcgaagcaaacagt
ggagctgtcaaacgggtaggtagaagtgatgcttttgccactgaatttgatctggaagca
gaagaatatgttccacttcccaaaggagaggtccacaaaaagaaagagatagtgcaggat
gtcacactccaagatctggatgcagcaaatgctcgacctcaaggtggccaggatatactt
tctttgatgggccaaatgatgaaaccgcggaagactgagatcactgataagcttcggcaa
gaaattaacaaggttgtgaaccgatatatagatgaaggtgtggcagagcttgttccagga
gttctatttattgatgaggttcatatgcttgatatggagtgcttctcatacttgaaccgt
gctcttgagagctcattatctccgatagtgatatttgcaacaaatagaggtgtttgcaac
gtaagagggactgatatgcccagcccccatggagtccctattgatctattagatcgattg
gttatcatccggactcaaatctatgatccctctgaaatgatccagattatagccattcgt
gcgcaagttgaagaattaaccgtggatgaagaatgcttggttctacttggggagattggg
caaagaacttcactaaggcacgctgtgcagcttctgtctcctgccagcattgtagcgaaa
atgaatggccgtgacaatatttgcaaggctgatatagaggaagtaacatcactctacttg
gatgctaaatcttcagcaaagcttttgcatgagcaacaagaaaaatacatctcatga
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