KEGG   Arabidopsis thaliana (thale cress): AT5G22950
Entry
AT5G22950         CDS       T00041                                 
Symbol
VPS24.1
Name
(RefSeq) SNF7 family protein
  KO
K12193  charged multivesicular body protein 3
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    AT5G22950 (VPS24.1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT5G22950 (VPS24.1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ath04147]
    AT5G22950 (VPS24.1)
Membrane trafficking [BR:ath04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    AT5G22950 (VPS24.1)
Exosome [BR:ath04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   AT5G22950 (VPS24.1)
SSDB
Motif
Pfam: Snf7 PSD4 NAD_binding_11 HTH_6 DUF7355 MbeB_N HTH_26 Prefoldin_2 RNAseD_HRDC_C
Other DBs
NCBI-GeneID: 832359
NCBI-ProteinID: NP_197686
TAIR: AT5G22950
UniProt: Q9FFB3 A0A178UMV9
LinkDB
Position
5:7681234..7682949
AA seq 229 aa
MERVMNIIKPKPDPKQLLRDWQRKLRQECRNIERQIRDIQKEERNVQKAIKEAAKRNDMV
SAKALAKEIVSSRRTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM
KAPQMAATMQEFSKEMTKAGVIEEFVNEAIDNALDSEDMEEEIDEEVDKVLTAIAGETAA
ELPVAVRKERIKVPAQKASTSREEEAVAEGVDDEEELEEIRARLAKVRS
NT seq 690 nt   +upstreamnt  +downstreamnt
atggagagagtgatgaacatcataaagccaaaacctgatcccaaacaactgttgcgtgat
tggcaacgcaaattacgtcaggagtgtcgtaacatcgaacgccaaatccgagatatacag
aaagaagagagaaatgtacagaaagctattaaagaagctgcaaagaggaatgatatggtc
tctgctaaggcacttgctaaggaaattgtgagttcgagaagaacagtgaaccggttatat
gagaataaggcacagatgaattctatatcaatgcatcttggagagagtgttgcgattgct
cgaacagttgggcatttgtcgaagagcgcagaggttatgaagcttgttaataatctcatg
aaggctccacagatggctgcaacaatgcaagaatttagcaaagagatgactaaggccgga
gttattgaagagtttgtgaatgaggccattgacaatgctctagattcagaggatatggaa
gaagagattgatgaagaggttgataaagtattgacagcaattgctggagaaaccgctgca
gagctcccagtagctgttaggaaggagaggataaaggtacctgcacagaaggcgagcact
tcacgtgaggaagaggcagttgcagagggtgttgatgatgaggaggaattggaggaaatt
cgagctcggctcgctaaagttagatcctaa

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