Arabidopsis thaliana (thale cress): AT5G23340
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Entry
AT5G23340 CDS
T00041
Name
(RefSeq) RNI-like superfamily protein
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT5G23340
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
AT5G23340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
LRR_RPS2
LRR_14
F-box_5
LRR_At1g61320_AtMIF1
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
832398
NCBI-ProteinID:
NP_197725
TAIR:
AT5G23340
UniProt:
Q9FMW7
A0A178UH53
LinkDB
All DBs
Position
5:7856039..7858319
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AA seq
405 aa
AA seq
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MSSVCVNEALTDDELRWVLSRLDSDKDKEVFGLVCKRWLNLQSTDRKKLAARAGPHMLRR
LASRFTQIVELDLSQSISRSFYPGVTDSDLAVISEGFKFLRVLNLHNCKGITDTGLASIG
RCLSLLQFLDVSYCRKLSDKGLSAVAEGCHDLRALHLAGCRFITDESLKSLSERCRDLEA
LGLQGCTNITDSGLADLVKGCRKIKSLDINKCSNVGDAGVSSVAKACASSLKTLKLLDCY
KVGNESISSLAQFCKNLETLIIGGCRDISDESIMLLADSCKDSLKNLRMDWCLNISDSSL
SCILKQCKNLEALDIGCCEEVTDTAFRDLGSDDVLGLKVLKVSNCTKITVTGIGKLLDKC
SSLEYIDVRSLPHVTEVRCSEAGLEFPKCCKVNFSGSLTEPDVLL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcggtctgtgttaacgaagcattaaccgatgacgagctgagatgggtattgtcg
agactagacagtgataaagataaggaagtgtttggtttggtctgcaagaggtggctaaat
ctgcagagtaccgaccggaagaagctagcggcacgtgctggtccacatatgctccgccgt
ctcgcttctaggttcactcaaatcgtcgaattggatttgtctcagtcaatttctaggtcc
ttttatccaggagttactgattctgacctcgctgttatctctgagggattcaagtttctc
agagttcttaatcttcacaactgtaaaggtattacagatactggattggcctcaattgga
aggtgtctttctttactgcagtttttggatgtatcatattgtagaaagctctcagataaa
ggattatcagctgttgcagaaggctgccatgatctaagggcattgcatttagcgggttgt
cgtttcatcaccgatgaatcgttgaaatcactctctgagagatgccgtgatctcgaagct
ctggggctacaaggctgcaccaatatcactgattcaggtcttgctgatcttgtgaaggga
tgcagaaagataaaatctttagacattaataaatgtagcaatgttggagatgctggagtt
tcgagcgtggcgaaagcttgtgcatcttccctcaagacactcaaattgctggactgttac
aaagtcgggaacgaatctatatcgtcgctggcgcagttttgcaagaatctggaaactctg
ataatcggtggatgcagagatatctctgacgaatctatcatgttactggcagattcctgt
aaagacagtctcaagaacttgaggatggattggtgcttgaatatatctgactcttccctt
agctgcattctcaagcagtgcaagaacttggaggctctagatattggttgctgtgaagag
gtcacagacactgctttccgggatttagggagcgacgatgttttgggattgaaggtttta
aaggttagcaactgcacgaagatcacagtaacagggataggcaagcttttggacaaatgc
agttccctggagtatatagatgtaaggtctcttccacatgtgacagaagtgagatgcagt
gaagctggtttggagttcccaaaatgttgtaaagttaacttttcaggtagtttaaccgag
ccagatgttctgctttga
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