Arabidopsis thaliana (thale cress): AT5G23430
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Entry
AT5G23430 CDS
T00041
Name
(RefSeq) Transducin/WD40 repeat-like superfamily protein
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ath04812
]
AT5G23430
Cytoskeleton proteins [BR:
ath04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
AT5G23430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
eIF2A
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_VPS8
PROPPIN
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
832409
NCBI-ProteinID:
NP_851064
TAIR:
AT5G23430
UniProt:
Q8H0T9
A0A654G3M2
LinkDB
All DBs
Position
5:complement(7893594..7900563)
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AA seq
837 aa
AA seq
DB search
MTTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS
GIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTE
FKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGK
TVLCGLQESLKIFSWEPIRCHDGVDVGWSRLSDMNVHEGKLLGCSYNQSCVGVWVVDLSR
TEPCMAGDTAQSNGHPEKRSCSGRDPVVLNDNNSKTVLGKLSVSQNVDPLLKETKSLGRL
SVSQNSDPSTKETKSIGRSSTSQNSESSMKESKPLGRLSVSQNSDVSKESRTFSSTGSLP
GTPHRVSSTNVSKATSGVSTAVSNAATSRRNFTKANPKANPVNKAADFAPVIVPRADPRI
EQATESRAELDIIARTMPYSLQAADSRRSPSSRNNPDLPDASVLEMSESQPVEPNNIPDG
GTLPGGKVGMRGATERSINDFRYKRYGRSNSRSRMGSPPRNHDENYDLVSHRSNRDPSPT
ESQKGGRFQSLVINRERRGRFSNFEGPVSNFSSGNMPAPNIRPSNMFKQRGNHMPVEQGI
DSPSEENIVEDIMGKHNQFVSSMQSRLAKLQVVRRYWERNDVKNSIGSIEKMADNAVTAD
VLGIITERNEILTLDNCTSLLPLLTALLGSGMDQHLSVSLDLLLKLVRLYGSPIYSSLSA
PASVGVDIEAEQRIERYSRCFVELEKVKACLPSLARRGGLVAKSVLELNLAFQEVSS
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaagcgagcctataagcttcaggaatttgtggcacattctgctgctgtcaat
tgtcttaagatcggaaggaagtcttctagggttctggtaacaggtggtgaagatcacaag
gtcaatctttgggctattggtaagcccaatgccattctgagcttgtatgggcactcaagt
ggaattgattcagtgacgtttgatgcttcggaggtcttagttgcagcaggagctgctagt
ggtactatcaaactttgggatttagaggaggcaaagattgtcaggactctcactggtcac
aggtccaattgcatctcagtggatttccacccttttggtgagttttttgcgtcaggctca
ctagacacaaatcttaagatatgggatatacgaaaaaagggctgcatccatacttacaag
ggtcacacgcgaggagtcaatgtactcagattcaccccagatggtcgctgggttgtatct
ggaggagaggacaacattgttaaggtttgggatttaacagctggaaaactgctgaccgag
tttaagagtcatgaagggcaaattcaaagcctagattttcatcctcatgaattcctactg
gcaacaggttcagctgatagaactgtaaaattctgggatctggaaacattcgagctgatt
ggttctggtggacctgagactgccggggtccgttgcctgagtttcaatccagatggaaag
actgtgctttgtggattgcaagaaagtctcaagattttctcatgggagccaattagatgt
catgatggagtggatgttggatggtcaagattgtcagatatgaatgttcacgagggaaag
cttcttggttgctcatacaatcagagttgtgtaggcgtgtgggttgtagatctctcgcgt
actgagccatgtatggctggagacactgcgcaatcaaatggtcatccagagaaacgatct
tgctcaggaagagatccagtagttctcaatgataataactcaaagacagttctcgggaag
ctgtccgtttcccaaaatgtagatcctttattgaaggaaacaaagtctctaggaagatta
tctgtttctcagaactctgatccttcgacaaaagaaacaaagtccattggaaggtcatca
acatcacaaaattcagagtcctcgatgaaggaatcaaagcctctcgggaggttgtcagtt
tctcaaaattcagacgtttctaaagagtcaaggacgttttcatccacaggaagtttacca
ggcactcctcatagggtcagttcgaccaatgtatcaaaagccacttcgggtgtttcaaca
gccgtctctaatgctgcaacgtcaaggaggaattttacaaaagctaacccaaaggcgaat
cctgtcaataaggcagcagattttgctccggtgattgtccccagagcagaccctagaata
gagcaggctactgaatccagagcagaacttgacataattgcaagaaccatgccgtattca
ttgcaggcggctgattcccgaaggtcacctagcagcagaaataaccctgatctgccagac
gcttcggttcttgaaatgtctgagtctcagccagttgaaccaaataatataccagatggg
ggtacacttcctggtggaaaggttggcatgcggggtgcaactgagcgaagcattaatgat
tttagatacaagagatatggcaggagtaattcaaggtcacggatggggtcacctccacga
aaccacgatgaaaactatgacttggtaagccacagatcaaatagagacccaagccccact
gaaagtcagaaaggaggaagattccagtcactcgtcataaatagggagaggagaggaaga
ttttcaaacttcgagggtcctgtttcaaatttttcaagtggaaatatgcctgctccaaac
atccgcccttcaaatatgttcaagcagagagggaaccatatgccagttgaacaagggatc
gattctccttctgaagaaaatattgttgaagacataatgggaaagcacaatcaatttgtc
agctctatgcagtctcgtttggctaagttacaggtagttcgtagatattgggaaaggaat
gatgtaaaaaattcgataggctcgatagagaagatggctgataatgctgttactgcggac
gtactgggtataataaccgagagaaatgagattttgacactggataattgtacctccctt
cttccccttctaacagctcttttagggagcggcatggatcagcatttgagcgtttccctg
gatttgctgctgaagcttgtcagactgtatgggtcaccaatttactcatcactgtcagct
ccagcatctgttggtgtagatatcgaggctgagcaaaggatcgagcgctacagccgttgc
tttgtagagctagagaaagtcaaagcatgccttccctctctagcaagaagaggaggtttg
gtggccaagtctgtgctcgaactcaacctagcatttcaggaagtttcatcataa
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