Arabidopsis thaliana (thale cress): AT5G23670
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Entry
AT5G23670 CDS
T00041
Symbol
LCB2
Name
(RefSeq) long chain base2
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00600
Sphingolipid metabolism
ath01100
Metabolic pathways
Module
ath_M00094
Ceramide biosynthesis
ath_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
AT5G23670 (LCB2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ath01007
]
AT5G23670 (LCB2)
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
AT5G23670 (LCB2)
Amino acid related enzymes [BR:
ath01007
]
Aminotransferase (transaminase)
Class II
AT5G23670 (LCB2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
832432
NCBI-ProteinID:
NP_197756
TAIR:
AT5G23670
UniProt:
Q9LSZ9
Structure
PDB
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All DBs
Position
5:7981641..7985398
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AA seq
489 aa
AA seq
DB search
MITIPYLTAVSTYFSYGLLFAFGQLRDFFRRFIDWWFTSNLQGYAPICLGHEDFYIRRLY
HRIQDCFERPISSAPDAWFDVVERYSNDNNKTLKRTTKTSRCLNLGSYNYLGFGSFDEYC
TPRVIESLKKFSASTCSSRVDAGTTSVHAELEECVTRFVGKPAAVVFGMGYATNSAIIPV
LIGKGGLIISDSLNHSSIVNGARGSGATIRVFQHNTPSHLERVLREQIAEGQPRTHRPWK
KIIVVVEGIYSMEGEICHLPEVVAICKKYKAYVYLDEAHSIGAIGKTGKGICELLGVDTA
DVDVMMGTFTKSFGSCGGYIAGSKELIQYLKHQCPAHLYATSIPTPSAQQIISAIKVILG
EDGSNRGAQKLARIRENSNFFRAELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR
QKVAVVVVGFPATPLLLARARICISASHSREDLIRALKVISKVGDLSGIKYFPAEPKKIE
QSKNDIKLD
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgataacgattccttatttaaccgctgtatccacctacttcagctatggattgctcttt
gcttttggtcagctccgagatttcttccgtcgcttcattgattggtggttcactagcaat
ctccagggatacgcgccgatctgtttggggcatgaggatttctatatcaggcgattgtat
catcggattcaggattgttttgaacgacctatatcgagtgcacctgatgcttggtttgat
gtggttgagcgctactctaatgacaacaacaagacgcttaagcgaacaacaaaaactagc
aggtgcctcaatttggggtcctacaattatcttgggtttggttcttttgatgaatattgc
acgcctcgtgttattgagtccttgaagaaattttcagcaagtacatgtagctctcgtgtt
gatgcaggaactacatccgtgcatgcagaacttgaggaatgtgttactaggtttgtggga
aagcctgctgctgttgtttttggcatgggctatgcaacaaattcggctatcattccagtc
ttgattggaaagggagggttgataataagtgattctttgaaccatagttctattgtcaat
ggtgctcgaggttctggagccactatccgtgttttccagcataacacgccttcccatttg
gaacgagttttgagagaacaaattgcagaaggtcaacctaggacacatcgaccatggaag
aaaattattgttgttgttgaaggtatttacagcatggaaggggagatttgtcatctaccg
gaagttgtggccatatgcaagaagtataaggcatatgtttatttggatgaagctcacagc
attggggcaattggtaaaacaggaaagggtatttgtgaactcctgggagttgacacagct
gatgtggacgtaatgatgggaaccttcacaaaatcttttgggtcttgtggtggctatatt
gctggatctaaggagctcatccaatatttgaagcatcaatgcccagctcatctttacgca
acatccataccaactccttccgcacaacaaattatatctgccattaaagttattctggga
gaggatggttcaaatcgaggggcacaaaagctagcaagaatacgtgagaacagcaacttt
ttccgggctgagctgcagaagatgggatttgaggtacttggagacaatgattccccagtc
atgcctataatgctttacaacccagcaaaaatcccagctttctcaagagaatgtctgcga
caaaaagtggcagtggtggtcgtgggtttcccagctacacctctactgctggctagggca
cgtatttgcatctccgcatctcattcaagagaagatcttataagagccctcaaggttata
agcaaagtaggtgaccttagcggaatcaaatatttcccggcagagccgaagaaaatagaa
cagtcgaaaaacgacatcaagctggattga
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