KEGG   Arabidopsis thaliana (thale cress): AT5G23730
Entry
AT5G23730         CDS       T00041                                 
Symbol
RUP2
Name
(RefSeq) Transducin/WD40 repeat-like superfamily protein
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04120  Ubiquitin mediated proteolysis
ath04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    AT5G23730 (RUP2)
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    AT5G23730 (RUP2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT5G23730 (RUP2)
Enzymes [BR:ath01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     AT5G23730 (RUP2)
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    AT5G23730 (RUP2)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     AT5G23730 (RUP2)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd WD40_WDHD1_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_C EIF3I Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_DCAF12 Beta-prop_NOL10_N Beta-prop_WDR75_1st YNR034W-A-like WD40_RFWD3 Beta-prop_Nup120_160 WD40_like Beta-prop_SCAP
Other DBs
NCBI-GeneID: 832438
NCBI-ProteinID: NP_568435
TAIR: AT5G23730
UniProt: Q9FFA7
Structure
LinkDB
Position
5:8005097..8006630
AA seq 368 aa
MNTLHPHKQQQEQAQQQEEARYEWDLSLSTVVSSSSSSASDVIGAIEFDPTDNIVATAGI
SRKIRFYGLPSLLRNNAVSGTGVSFVDQATACEYYICTPAKLSSLRWRPGSGGRVIGSGD
YDGVVMEYDLEKRTPVFERDEHGGRRVWSVDYTRHGGASTVGASGSDDGTMQVWDPRCPP
EESVGVVRPAGICRSAVCCVEFDPSGGPAVAVGCADRKGYVYDIRKLVDPALTLQGHTKT
VSYVRFLDGGTVVTAGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSVWRNGALFGCGS
ENNRVFVYDRRWGKPVWVDGFEPVGMNSGSDKRFVSSVCWRQSGVDQCTLVAGGSDGVLQ
VYVGKRKP
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgaacactcttcatcctcacaagcagcaacaagaacaagcacaacaacaagaagaagct
agatacgaatgggatctttctctctccaccgtcgtatcttcctcctcctcctccgcctcc
gacgttatcggagctattgaattcgatcccactgataacatcgtcgctaccgccgggatt
tcaagaaagattcgtttttacggcctcccttctcttttacgtaacaacgctgtctccggt
accggagtttccttcgtcgatcaagccaccgcctgcgaatattacatctgtactccggcg
aaacttagtagtctccggtggagacccgggtcgggcggtcgggttattgggtcgggagat
tacgacggcgtagtgatggagtacgatcttgagaagaggacgccggtattcgaaagggac
gagcacggtggtcgtcgtgtatggagcgtagattacactcgtcacggcggcgcttcgacg
gtgggcgcgtcgggatcggatgacgggactatgcaagtatgggatccgaggtgtccgccg
gaagaatctgtcggtgttgtacgaccggcggggatttgccggagtgctgtttgttgcgtc
gagttcgatccttccggtggaccagccgtggccgtcggatgcgctgatcggaaagggtac
gtttacgatataaggaaactcgttgacccggcgttgactttacaaggtcatacgaaaacg
gtgtcgtatgtgaggttcctcgacggtgggacggtggtgacggcaggtacggacggttgt
ttgaagctgtggagcgtggaggatgggcgcgtgattcgcacgtacgaagggcatgtgaat
aatcggaacttcgtggggttatctgtgtggagaaacggcgcgttgtttggttgtggatcg
gaaaacaacagggtgtttgtgtacgataggagatgggggaagccggtttgggtagatggg
tttgaaccagttggtatgaattctggttcggataagcggttcgtgagtagcgtctgttgg
aggcaatcaggtgtggaccagtgtaccctagtggctggaggatctgatggagtattacag
gtttacgtgggcaaaagaaaaccatag

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