Arabidopsis thaliana (thale cress): AT5G24120
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Entry
AT5G24120 CDS
T00041
Symbol
SIGE
Name
(RefSeq) sigma factor E
KO
K03093
RNA polymerase sigma-I factor
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT5G24120 (SIGE)
Transcription machinery [BR:
ath03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AT5G24120 (SIGE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Response_reg_2
GerE
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
832477
NCBI-ProteinID:
NP_001330408
TAIR:
AT5G24120
UniProt:
Q9ZNX9
A0A178URC9
LinkDB
All DBs
Position
5:complement(8157151..8160343)
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AA seq
517 aa
AA seq
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MGVVSISSSAARSPLGLGNDLLTHRSSLKKPSIVAFKADDSSNSALIIPPREQVLIPAEK
HNEKKREVTRRKPCKTPKKPLSLEHNSAPSCSLGVDYNEAAARLESIYKLSPATTTLVED
DVEDGGSKAKVSRRRKRKESGEEKKVVVRNNVKKEKRMSLDKRIALKRNVQEKPVVASVD
KKVTKRQQEEEKIERLVRDYSASNDIVSLDWKKMKIPPVLSSTEHAWLFKLMQPMKALLE
VKDVLQKSLGREPREAEIAGEINMTAGEVKKKIEIGRAARNKLIKHNLRLVLFVMNKYFH
EFTNGPKFQDLCQAGMRGLITAIDRFEPKRKFRLSTYGLFWIRHAIIRSMTTSNFTRVPF
GLESVRVEIYKAKTELWFEMGRPPTEDEVVERLKITPERYREVLRAAKPVLSLNSKHSVT
QEEFINGITDVDGVGANNSRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE
IAGNLNISREMVRKHEVKALMKLKHQARVDYLRQYIV
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgtctatttcaagttcagctgcaagatctccactcgggttgggcaacgat
cttttgacacatcggtcttcacttaaaaagccatccattgttgcttttaaagccgatgat
tccagcaattcagctttgatcattcctcctcgtgagcaagttttgattcctgctgaaaag
cataatgagaagaagagagaagtaacgaggagaaagccttgtaaaaccccgaaaaaaccg
ctttccttggaacataattcggctccttcgtgttcgttaggagtagattacaatgaagct
gctgcaagacttgaaagcatatacaagcttagtcctgcaacaaccacattagtcgaggat
gatgttgaagatggcggctctaaagccaaagtttcacggaggagaaaaaggaaagaaagt
ggtgaggagaagaaagtggttgtgaggaataatgtgaagaaggaaaaacgtatgagtctt
gataaacggattgctttgaagagaaacgttcaagagaaaccagtcgttgcttctgttgat
aagaaagtaacaaagaggcagcaagaagaggagaagatcgagaggcttgtgcgggactat
tcagcttctaatgatatagtgagcttggactggaaaaaaatgaagatacctcctgttctt
tcttctactgaacatgcttggttgttcaagttgatgcaacctatgaaggctcttcttgaa
gtgaaagatgtattgcaaaagagcttgggaagagagcctagggaagctgaaatagccggg
gagatcaatatgactgcgggtgaagtaaaaaagaaaatcgaaataggtagagctgcaaga
aacaaacttattaagcacaatctccggcttgtcttgtttgttatgaacaaatactttcat
gagtttaccaacggaccaaaattccaagacctttgtcaagcgggtatgagagggcttatc
acagcaattgaccgctttgagccgaaaaggaagtttcgtctttcgacttatggtttgttt
tggattagacatgccatcatacggtcaatgacaacttcaaacttcactcgtgtcccattt
ggacttgaatcggttagagtggagatatataaagcaaagactgagctatggtttgagatg
ggaagacctccaacggaggacgaggtagttgagagactcaagataacacctgagagatac
cgtgaagtattgagggctgcaaaaccggttttgtcactaaattcaaaacattcggttact
caagaagaattcatcaacggaatcacagatgttgatggtgttggagctaataacagcaga
cagcctgctcttctcaggctcgctctcgacgatgtgctcgattcattgaagccgaaagag
agtctggttattcgacagaggtacggtcttgatggaaaaggcgacaggactctaggagag
atagctggaaatctcaacatctctagagaaatggttaggaaacatgaagtcaaggccttg
atgaagcttaagcatcaggccagagttgattaccttcgtcaatacatcgtctaa
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