Arabidopsis thaliana (thale cress): AT5G24520
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Entry
AT5G24520 CDS
T00041
Symbol
TTG1
Name
(RefSeq) Transducin/WD40 repeat-like superfamily protein
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
AT5G24520 (TTG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT5G24520 (TTG1)
03036 Chromosome and associated proteins [BR:
ath03036
]
AT5G24520 (TTG1)
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
AT5G24520 (TTG1)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
AT5G24520 (TTG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_EIPR1
WD40
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_EML_2
WDR55
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_WDR3_2nd
Beta-prop_WDR41
ANAPC4_WD40
MIOS_WD40
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
832523
NCBI-ProteinID:
NP_001318637
TAIR:
AT5G24520
UniProt:
Q9XGN1
A0A178UQK6
LinkDB
All DBs
Position
5:complement(8370317..8372847)
Genome browser
AA seq
341 aa
AA seq
DB search
MDNSAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDS
DSMTVKPLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPI
SVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHD
IAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILM
DSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGP
NGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggataattcagctccagattcgttatccagatcggaaaccgccgtcacatacgactca
ccatatccactctacgccatggctttctcttctctccgctcatcctccggtcacagaatc
gccgtcggaagcttcctcgaagattacaacaaccgcatcgacattctctctttcgattcc
gattcaatgaccgttaagcctctcccgaatctctccttcgagcatccttatcctccaaca
aagctaatgttcagtcctccttctctccgtcgtccttcctccggagatctcctcgcttcc
tccggcgatttcctccgtctttgggaaattaacgaagattcatcaaccgtcgagccaatc
tcggttctcaacaacagcaaaacgagcgagttttgtgcgccgttgacttccttcgattgg
aacgatgtagagccgaaacgtctcggaacttgtagtattgatacgacgtgtacgatttgg
gatattgagaagtctgttgttgagactcagcttatagctcatgataaagaggttcatgac
attgcttggggagaagctagggttttcgcatcagtctctgctgatggatccgttaggatc
tttgatttacgtgataaggaacattctacaatcatttacgagagtcctcagcctgatacg
cctttgttaagacttgcttggaacaaacaagatcttagatatatggctacgattttgatg
gattctaataaggttgtgattctcgatattcgttcgccgactatgcctgttgctgagctt
gaaagacatcaggctagtgtgaatgctatagcttgggcgcctcagagctgtaaacatatt
tgttctggtggtgatgatacacaggctcttatttgggagcttcctactgttgctggaccc
aatgggattgatccgatgtcggtttattcggctggttcggagattaatcagttgcagtgg
tcttcttcgcagcctgattggattggtattgcttttgctaacaaaatgcagctccttaga
gtttga
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integrated database retrieval system
