Arabidopsis thaliana (thale cress): AT5G25780
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Entry
AT5G25780 CDS
T00041
Symbol
EIF3B-2
Name
(RefSeq) eukaryotic translation initiation factor 3B-2
KO
K03253
translation initiation factor 3 subunit B
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT5G25780 (EIF3B-2)
03012 Translation factors [BR:
ath03012
]
AT5G25780 (EIF3B-2)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
AT5G25780 (EIF3B-2)
Translation factors [BR:
ath03012
]
Eukaryotic type
Initiation factors
eIF-3
AT5G25780 (EIF3B-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
WD40_WDHD1_1st
RRM_1
ANAPC4_WD40
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
832647
NCBI-ProteinID:
NP_568477
TAIR:
AT5G25780
UniProt:
Q8GUM1
A0A178UL74
LinkDB
All DBs
Position
5:complement(8973247..8976913)
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AA seq
714 aa
AA seq
DB search
MAAVVDIDVLTAQLGINWSDVNLDSIQLPPGNDFGIESDDESVYQDDQSEFDTGFGNIIV
VDHLPVVPKEKFEKLEGVVKKIYNQLGVIKENGLLMPVDPDTKMTLGYCFIEFNTPQEAQ
NAKEKSHGYKLDKSHIFAVNMFDDFDRLMNVKEEWEPPQERPYVPGENLQKWLTDDKARD
QLVIRFGHDTEVYWNDARQKKPEPVHKRSYWTESYVQWSPIGTYLVTLHKQGAAVWGGAD
TFTRLMRYQHSMVKLVDFSPGEKYLVTYHSQEPSNPRDASKVEIKVFDVRTGRMMRDFKG
SADEFSIGGPGGVAGASWPVFRWAGGKDDKYFAKLSKNTISVYETETFSLIDKKSMKVDN
VVDICWSPTDSILSLFVPEQGGGNQPAKVALVQIPSKVELRQKNLFSVSDCKMYWQSSGE
YLAVKVDRYTKTKKSTYSGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIH
GDQPRPDVSFYSMKTAQNTGRVSKLATLKAKQANALFWSPTGKYIILAGLKGFNGQLEFF
NVDELETMATAEHFMATDIEWDPTGRYVATSVTTVHEMENGFTIWSFNGNMVYRILKDHF
FQLAWRPRPASFLTAEKEEEIAKNLRNYSKRYEAEDQDVSLLLSEQDREKRRALNEEWQK
WVMQWKSLHEEEKLVRQNLRDGEVSDVEEDEYEAKEVEFEDLIDVTEEIVQELM
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggttgttgatattgatgtcctaacagctcagttagggattaattggtcagat
gttaatctcgattcaatccaacttcctcctggaaacgactttgggatcgaaagtgatgat
gaaagtgtttaccaagatgaccagtcagaattcgacactggattcggtaacattatcgtt
gtcgatcacctccctgttgttcccaaggagaagtttgagaaactagaaggtgttgttaag
aaaatttacaaccagttaggtgtgattaaggaaaatggactgttgatgcccgttgatccc
gatactaagatgacattgggctactgttttattgagttcaacactcctcaggaagcacaa
aacgctaaggaaaagtctcatggctacaagttggacaagtctcacatatttgctgttaat
atgttcgatgatttcgataggttgatgaatgtgaaggaggagtgggagcctcctcaagaa
aggccctatgtccctggggaaaatttgcagaagtggcttactgatgacaaagcccgggac
cagctagtcattcgttttggccatgatactgaagtttactggaatgatgctaggcagaag
aagcctgaacctgttcataagcgttcttattggacagagagttatgtgcagtggtctcca
ataggtacataccttgtgacacttcacaagcagggggcagctgtttggggtggtgctgat
acatttacgcgtctcatgcgttatcagcattcaatggtcaaactagttgatttctcgcct
ggtgagaaatatcttgtaacttaccatagccaagaaccaagcaatccgagagatgcaagt
aaagtagagattaaggtctttgatgtgagaaccgggaggatgatgagagatttcaagggt
agtgctgatgagttttcaattggaggacctggtggtgttgctggtgcctcttggcctgtt
ttcagatgggctggcggaaaagatgataaatactttgccaagctgagcaaaaacactatc
tctgtctatgagactgagactttcagcctaatagacaagaaatccatgaaggttgataat
gttgtggatatttgctggtctcccactgattcaatcctttcattgtttgttcctgaacaa
ggtggtggaaaccaaccagccaaggttgctctagtccaaatcccgagtaaggtagagctg
aggcagaagaatctcttcagtgtgagcgactgcaagatgtactggcagagtagtggagag
tatcttgctgttaaggttgatcgatacacaaaaactaagaagagtacatactctggattt
gagcttttccgtatcaaagaaagggatattccaatcgaggttcttgagctggataacaag
aacgataagatcattgctttcgcgtgggagcccaagggtcacaggtttgctgtgattcat
ggtgaccagccaagaccggatgttagtttctactcgatgaagactgcacaaaacactgga
agagtttcaaagctcgcaactttgaaggccaaacaagccaatgccctcttctggtcgccc
acaggcaagtacatcattcttgctgggttaaaaggtttcaatggccagcttgaatttttc
aacgtggatgagctcgagacaatggccacagctgaacacttcatggccacagatatcgaa
tgggacccaactggaaggtacgttgcaacctcagtgacaacagtccacgagatggagaat
gggttcaccatatggtctttcaatgggaatatggtttaccggatactgaaggatcatttc
ttccagttggcttggcgtccaagaccggcatcattcttgactgcggagaaggaagaagag
atagcaaagaacctgaggaattacagcaagaggtatgaggcagaggatcaggacgtgtcg
ttgctattgagtgaacaagacagagagaagaggagggcattgaatgaagagtggcagaaa
tgggtgatgcagtggaagtctctgcatgaagaggagaaactcgtgaggcaaaatcttcgg
gatggtgaagttagtgatgtggaagaagatgagtatgaagccaaagaagttgagtttgag
gatcttattgatgttactgaggaaattgttcaagagttgatgtaa
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