Arabidopsis thaliana (thale cress): AT5G25800
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Entry
AT5G25800 CDS
T00041
Name
(RefSeq) Polynucleotidyl transferase, ribonuclease H-like superfamily protein
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AT5G25800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ath03009
]
AT5G25800
Ribosome biogenesis [BR:
ath03009
]
Eukaryotic type
Pre-60S particles
RNases
AT5G25800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
YfkB
Motif
Other DBs
NCBI-GeneID:
832649
NCBI-ProteinID:
NP_197952
TAIR:
AT5G25800
UniProt:
Q8L7M4
LinkDB
All DBs
Position
5:complement(8979571..8982891)
Genome browser
AA seq
567 aa
AA seq
DB search
MSSSKRKRGAETAAEDCDDGTDKSNTGNSFFDIYGPEAKAELDFKSPETTLNLQDVQGLV
TWVLAEGFMPSWVFIKNKPLIPKVVLLYLPGLDAALYLSHSKTLSSLKSCCGNPMALLAL
SCVVDEMRTIDTILTCKGRKKKTVTSSVEPPPLVSSPEACNLMGKSFVELTKDIPFPVSY
YTLSQKEMEQNGYTFEKLELTPTLPAPSGSCPPEIVALDCEMCITKEGLELTRVTLVDIQ
GQVLLDKLVMPTNPITDYNTRYSGITAVMMEGVTTTLKDIQEEFLKLVFKETILVGHSLE
NDLLSLKISHNLVIDTAVLYKHPHGRSYKTKLRILAKKFLAREIQESESGHDSAEDAKAA
MDLALLKIKHGPDFGSPPEVIRKKLLAVLNESGKTTSIIDNINIVKRYASESSNAIPVSS
DDEALSKAVKEVKNKRSQFVWTQFSELNAHFQSRADDPQKLNSRLAEMISLLTCNKKSGL
KKSNVSPETKEILKKMNERVQSLYAALPTNAMFIVCTGHGDTSIVHRVRKMLKDEDEIGF
DREKLVKVLEELQAQAEVALCFVGIKQ
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcgaagcggaagcgcggcgccgaaaccgccgcggaagattgtgacgacggt
actgataagagcaataccggaaacagtttcttcgatatatatggacccgaagcgaaagca
gaactcgatttcaaaagccctgaaacaacattgaacttacaagatgttcaaggacttgtg
acatgggttcttgcagaaggttttatgccttcatgggtatttattaagaacaagcctctc
attccaaaggttgtactgctctaccttcctggattggatgcagctttatacttatcacat
tctaaaactctgtctagtttgaaatcatgttgtggcaatcctatggcgcttttagctttg
agctgtgtagttgatgagatgaggacaatcgatacaatccttacttgcaagggtagaaaa
aagaaaactgttactagttcagtggaaccacctccccttgtatctagcccagaagcatgc
aatctgatggggaaatcgttcgttgagctcacgaaagatataccattccctgttagttac
tacactctaagtcaaaaggaaatggaacaaaatggttacacttttgaaaaactcgagttg
acacctacacttcctgcaccatcaggatcatgtccccccgaaatcgtggctcttgattgc
gagatgtgtattacaaaggagggtttggagttgacgagagtgacgctggtggatatccaa
ggacaggttctattagataaattagtcatgccaacaaatcctattactgattacaacaca
agatatagtggaataacagctgtgatgatggagggagttacaacaacacttaaagatatt
caggaagagttcttaaagctggttttcaaagagaccatattagtcggacactccttggaa
aatgacttgttgtctttgaagatctctcataatctggtgattgacactgcagtactatac
aagcatccacatggaagatcttataaaactaaacttcgaattctagcaaaaaagtttctt
gctagagagatacaggagtctgaatccggacatgacagcgcagaggatgcaaaagcagcc
atggatttggcactattgaagataaaacatggacctgattttggttcaccaccggaagtg
ataagaaaaaagctcctcgccgttttaaatgagagcgggaaaacgacttctataattgac
aatatcaacatcgtgaagcgatatgcttctgagtcatcaaatgcaattccagtttcgtct
gacgacgaagcactttcaaaggccgtgaaggaggtaaagaacaagcggtctcaattcgtt
tggacacagttctcagaattgaatgcacatttccagagcagagcggatgatccacagaaa
ctaaactccagactagccgagatgatctcattgcttacatgtaacaaaaagtccggcctt
aagaaaagcaatgtctcacctgaaacaaaggaaatcttaaagaaaatgaatgaaagagtc
caatccctttatgctgcattacctacaaatgcgatgtttatagtttgcaccggacacgga
gacacatccattgtacacagagtgcggaaaatgcttaaagatgaggatgaaatcgggttt
gaccgtgagaaacttgtcaaggttcttgaagagcttcaagcacaagccgaagtagctctc
tgttttgtaggtatcaagcaataa
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integrated database retrieval system
