Arabidopsis thaliana (thale cress): AT5G26742
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Entry
AT5G26742 CDS
T00041
Symbol
emb1138
Name
(RefSeq) DEAD box RNA helicase (RH3)
Organism
ath
Arabidopsis thaliana (thale cress)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
zf-CCHC
CMS1
ERCC3_RAD25_C
zf-CCHC_2
Cas3-like_C_2
P-loop_SecA
YgbB
Motif
Other DBs
NCBI-GeneID:
832713
NCBI-ProteinID:
NP_001031943
TAIR:
AT5G26742
UniProt:
Q8L7S8
A0A178UT03
LinkDB
All DBs
Position
5:complement(9284557..9289003)
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AA seq
748 aa
AA seq
DB search
MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPS
AVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR
GITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRL
PKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRII
DLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKL
ARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQT
KRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVD
LVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPT
VGDLLESSADQVVATLNGVHPDSIKFFSATAQKLYEEKGTDALAAALAHLSGFSQPPSSR
SLLSHEKGWVTLQLIRDPTNARGFLSARSVTGFLSDLYRTAADEVGKIFLIADDRIQGAV
FDLPEEIAKELLEKDVPEGNSLSMITKLPPLQDDGPSSDNYGRFSSRDRMPRGGGGSRGS
RGGRGGSSRGRDSWGGDDDRGSRRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPS
RERSFGGSCFICGKSGHRATDCPDKRGF
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacggtaggagttccatcactataccaagttcctcaccttgaaatctccaaa
cccaattccaaaaagaggtctaattgtttatctttatctctcgataagcctttcttcact
cccttatctcttgttcgtagaactcgtcgtatccattcctcttctcttcttgttccttct
gctgttgctactcctaattctgttctcagtgaagaagctttcaaaagtcttggtctttct
gaccatgacgaatatgaccttgacggcgacaacaacaacgttgaagctgatgatggtgaa
gaactcgctatctctaaacttagtttgcctcaacgtcttgaagagtctcttgagaaacgt
ggtatcactcatctcttccccattcagagagctgtgttggtacctgcactgcaaggaaga
gatattatagctcgtgcaaagacaggaactggaaagactttggcttttggtattcctatc
attaaacgtctcactgaagaagctggagactacactgctttcaggaggtctggtcgtctt
cctaagttccttgtccttgcgccgacccgagagctggctaagcaagtggagaaggagatt
aaggagtctgcaccttatttgagcactgtttgtgtgtatgggggagtttcttataccatt
cagcagagtgctttaactcgtggtgttgatgttgttgttggaactcctggaagaatcatt
gatttgattgaaggaaggagtcttaaattgggagaagttgagtatttggtacttgatgaa
gctgatcagatgcttgctgttgggtttgaggaggccgtggaatcgattcttgagaatctt
ccaactaagcgacaaagtatgcttttctcagcaactatgcctacttgggttaagaagttg
gcgaggaagtaccttgacaatcccttgaatattgatctggttggagaccaagatgagaag
ctcgcagagggtatcaaactttatgcaatcgcaaccacatcgacatcaaaacgcactatt
ctaagcgaccttattacagtgtatgcgaagggtggcaagaccattgtttttacccaaact
aaaagagatgcagacgaagtttctcttgcattgtcaaacagtatagctaccgaagcactt
catggagatatatctcagcatcaaagagagagaacactcaatgctttccgtcaagggaaa
ttcaccgtattagttgccactgatgttgcatctcgtggacttgacatcccgaacgtagat
ctagttatccactatgaacttcctaatgacccagaaacttttgtgcaccgttctggtcgt
actgggcgtgcagggaaagaaggctctgccattctcatgcacaccagcagccaaaagaga
acagtgaggtctctggagcgtgacgtaggctgccattttgaattcattagcccaccaact
gttggagacttgttggaatcgtcagcagaccaagtggtggccactctaaatggtgttcac
cctgactccataaagtttttctcagcaactgctcaaaaactatatgaggagaaaggaaca
gatgctttagctgcagctctagctcacctgagtggtttctctcagccgccttcatcaaga
tctctcctcagccatgagaagggatgggtgactttgcaattgatccgagatccaacgaac
gctagaggctttctgtctgcgaggtctgttactggttttctttccgatctttaccgtaca
gctgcagatgaagttggaaaaatcttcttgatcgccgatgacaggatccaaggagctgta
tttgatctaccagaggagatcgcgaaagagctcctagagaaagatgtccccgaaggcaac
agtttatccatgataacaaagttacctccacttcaagatgacggaccatctagtgataac
tacggacggttctctagcagagacaggatgcctagaggaggaggaggttctagagggtca
agaggcggtagaggaggatcatcacgaggccgtgatagttggggaggtgatgatgacaga
ggtagtagaaggagcagtggtggaggaagcagctggtcccgaggtggtagtagttccaga
ggaagttctgatgattggttgatcggtggcagaagttcatcaagcagcagagctccttcg
cgggagagaagttttggaggttcatgcttcatttgtgggaaatctggacacagggcaaca
gattgtcctgataagagaggattttag
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integrated database retrieval system
