Arabidopsis thaliana (thale cress): AT5G26780
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Entry
AT5G26780 CDS
T00041
Symbol
SHM2
Name
(RefSeq) serine hydroxymethyltransferase 2
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00260
Glycine, serine and threonine metabolism
ath00460
Cyanoamino acid metabolism
ath00630
Glyoxylate and dicarboxylate metabolism
ath00670
One carbon pool by folate
ath01100
Metabolic pathways
ath01110
Biosynthesis of secondary metabolites
ath01200
Carbon metabolism
ath01230
Biosynthesis of amino acids
ath01240
Biosynthesis of cofactors
ath04981
Folate transport and metabolism
Module
ath_M00532
Photorespiration
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AT5G26780 (SHM2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AT5G26780 (SHM2)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AT5G26780 (SHM2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AT5G26780 (SHM2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AT5G26780 (SHM2)
Enzymes [BR:
ath01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AT5G26780 (SHM2)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
832736
NCBI-ProteinID:
NP_001331385
TAIR:
AT5G26780
UniProt:
Q94C74
A0A178UER6
Structure
PDB
PDBj
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All DBs
Position
5:9418137..9422228
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AA seq
517 aa
AA seq
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MALALRRLSSSVKKPISLLSSNGGSLRFMSSLSTAAMAESEKSRSSWIKQLNASLDEIDP
EVADIIELEKARQWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM
AETLCQKRALEAFQLDPSKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSH
GYQTDTKKISAVSIFFETMPYRLDENTGYIDYDQLEKSAVLFRPKLIVAGASAYARLYDY
ARIRKVCNKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK
GLKEINKQGKEVMYDYEDRINQAVFPGLQGGPHNHTITGLAVALKQARTPEYKAYQDQVL
RNCSKFAETLLAKGYDLVSGGTDNHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTVPGD
VSAMVPGGIRMGTPALTSRGFIEEDFAKVAEYFDLAVKIALKIKAESQGTKLKDFVATMQ
SNEKLQSEMSKLREMVEEYAKQFPTIGFEKETMRYKE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcgttggctcttcgtagactctcctcttccgttaagaaaccgatctcgcttctctcc
tctaatggcggttcactccgtttcatgtcgtctttatcaaccgcagctatggcggaatcg
gagaaatctcgttctagttggattaagcaattgaatgcatctctagatgaaatcgatcct
gaagttgcggatattatcgaattagagaaggctagacaatggaagggatttgaacttata
ccgtcagagaatttcacttctctatctgtgatgcaagccgttggttctgttatgactaat
aagtatagtgaaggataccctggagctagatactatggaggaaatgagtacattgacatg
gctgagacattatgtcaaaaacgcgcattagaagcttttcagttagatccttctaaatgg
ggagtcaatgtgcagtctttatcaggatcaccagctaatttccaagtttacactgcattg
ttgaagcctcatgaaagaatcatggcacttgatttacctcatggtggacatctttctcat
ggttatcagactgacacgaagaaaatatcggctgtatccatcttttttgagacaatgcca
tacagattggatgagaacactggttacattgattatgaccagctagaaaagagtgccgtg
cttttcagaccgaaacttattgttgcgggtgcaagtgcttatgctcgtctatatgactat
gcacgtattcgtaaggtctgtaacaagcaaaaggcagttatgttggctgatatggctcat
attagtgggttggttgctgctggcgttattccttctccttttgagtatgcagatgttgtt
acgactacaactcacaaatcgcttcgcggtcctagaggggctatgatattctttaggaag
gggttaaaagagattaacaaacaagggaaagaggtcatgtatgactatgaggacagaatt
aatcaagctgtttttcctggactgcaaggtggtccacataatcacactataacgggtcta
gcagttgctctgaagcaggcaagaactcctgagtacaaggcctaccaggatcaagttctc
cgtaattgctcaaagtttgctgagactttgcttgcgaaaggatatgatttagtgtctgga
ggcactgataatcatttagttttggtgaatctgaaaaacaagggaatagatggatcaaga
gtggaaaaagtattagaattagtacatattgcagcaaacaagaatactgttcctggtgat
gtttctgccatggttcccggtggcatccgtatgggaacaccagccctcacatcaagagga
ttcattgaggaagattttgcaaaagtggcggagtattttgatttagccgtcaagatagcc
ttaaagatcaaagcagagtctcaaggaacaaagttgaaagactttgtagcaacaatgcaa
tcaaatgagaaattacagtcagagatgtcaaagctccgtgagatggtagaagaatatgct
aagcaattcccaacgattgggttcgagaaagagacgatgagatacaaagagtag
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